Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488564

Identifier: 103488564

GI number: 103488564

Start: 3239573

End: 3240559

Strand: Direct

Name: 103488564

Synonym: Sala_3088

Alternate gene names: NA

Gene position: 3239573-3240559 (Clockwise)

Preceding gene: 103488563

Following gene: 103488565

Centisome position: 96.84

GC content: 65.25

Gene sequence:

>987_bases
ATGGGTGTTGTGCGTCAACTTCGGCAGATTTCCGAGGATGATACGGGGGTCGACGTCGCCTTCCGCGCCGACGTCCATGC
CGGGCTGTCCCAGACGCCCAAGGCAATCCCCGCGCGCTGGTTCTATGACACAACGGGCTCGGCGCTGTTCGAGGATATCA
CCGCGCTCCCCGAATATTATCCGACGCGCAGCGAGACGGATCTGTTGACGCGGCACGCCGCCGACATCGCCGCGACGATC
GGGCCGGGCCGCGCGGTGGTCGAGCTGGGATCGGGCAGTTCGACCAAGACGCCGCTGCTCCTTGCAGCCATCGACCCCGC
GGCCTATGTCCCCGTCGACATTTCGGGCGATTTCCTGCGGGACAGCGCCGAGGCGCTCGCGGCGCGCTTTCCGCGGCTCC
CCGTCTATCCCGTCGAAGCCGACTTCACACAGAAGGTCGCGCTGCCGCGCGAAATCTGCGCGCTGCCCAAGCTTGGCTTC
TTTCCCGGCTCGACGATCGGCAACATGGTCGCACGCACCGCGGTCGACCTGCTGCGCAACTGGCGCGCGGCGCTGGGCGA
CGGGTCGCTGATGCTGATCGGCATCGACCGGATCAAGGATATTGCGGTGCTCGAACGCGCCTATGACGATCCGGCGGGCG
TGACCGCGGCCTTCAACCTCAATCTGATCGAGCGCATCAACCGCGAGCTTGGCGGCGACATGGCGCTCGACAATTTCACG
CACCGCGCGGTCTGGAACGACACGCATGCGCGCATCGAAATGCACCTTGTCGCCATGTGCGACATGGACTTCACCGTCGA
TGGCCAAGCCTATCATATGGCAAAAGGCGAAACGATCCACAGCGAGAACAGCCATAAATATGGCCCGCGCGACGCCAATC
TGCTGCTCCGCGCCGGCGGTTGGACTCCCATCGCGACGTGGGACGATGCCGACCCGGCCTTCGCGCTGATCCTTGCCGAA
GCGACCGAGTTTCGCTCGGCCCCCTGA

Upstream 100 bases:

>100_bases
GCCACCCCGCGCGGTCACATGCGCGCGACATACCGCAATTTCTTCTACCCCCACCAGCGCTGGCAGTTCACCGGCGTGCG
GCTCGCAAAGGATCTCTGAC

Downstream 100 bases:

>100_bases
TCCGCGCCTCTTGACGGAGACGGTCGATCACGTAGGGCAACCATCCATATCGCCATCCCGGCGAAGGCCGGGATCCCGCC
GTTTCCGTAAGACGCACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: S-Adenosyl-L-Methionine-Dependent Methyltransferase; S-Adenosyl-L-Methionine-Dependentmethyltransferase; Methyltransferase Type; Conserved Domain Protein; Conserved Protein

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MGVVRQLRQISEDDTGVDVAFRADVHAGLSQTPKAIPARWFYDTTGSALFEDITALPEYYPTRSETDLLTRHAADIAATI
GPGRAVVELGSGSSTKTPLLLAAIDPAAYVPVDISGDFLRDSAEALAARFPRLPVYPVEADFTQKVALPREICALPKLGF
FPGSTIGNMVARTAVDLLRNWRAALGDGSLMLIGIDRIKDIAVLERAYDDPAGVTAAFNLNLIERINRELGGDMALDNFT
HRAVWNDTHARIEMHLVAMCDMDFTVDGQAYHMAKGETIHSENSHKYGPRDANLLLRAGGWTPIATWDDADPAFALILAE
ATEFRSAP

Sequences:

>Translated_328_residues
MGVVRQLRQISEDDTGVDVAFRADVHAGLSQTPKAIPARWFYDTTGSALFEDITALPEYYPTRSETDLLTRHAADIAATI
GPGRAVVELGSGSSTKTPLLLAAIDPAAYVPVDISGDFLRDSAEALAARFPRLPVYPVEADFTQKVALPREICALPKLGF
FPGSTIGNMVARTAVDLLRNWRAALGDGSLMLIGIDRIKDIAVLERAYDDPAGVTAAFNLNLIERINRELGGDMALDNFT
HRAVWNDTHARIEMHLVAMCDMDFTVDGQAYHMAKGETIHSENSHKYGPRDANLLLRAGGWTPIATWDDADPAFALILAE
ATEFRSAP
>Mature_327_residues
GVVRQLRQISEDDTGVDVAFRADVHAGLSQTPKAIPARWFYDTTGSALFEDITALPEYYPTRSETDLLTRHAADIAATIG
PGRAVVELGSGSSTKTPLLLAAIDPAAYVPVDISGDFLRDSAEALAARFPRLPVYPVEADFTQKVALPREICALPKLGFF
PGSTIGNMVARTAVDLLRNWRAALGDGSLMLIGIDRIKDIAVLERAYDDPAGVTAAFNLNLIERINRELGGDMALDNFTH
RAVWNDTHARIEMHLVAMCDMDFTVDGQAYHMAKGETIHSENSHKYGPRDANLLLRAGGWTPIATWDDADPAFALILAEA
TEFRSAP

Specific function: Unknown

COG id: COG4301

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35678; Mature: 35547

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVRQLRQISEDDTGVDVAFRADVHAGLSQTPKAIPARWFYDTTGSALFEDITALPEYY
CCHHHHHHHHCCCCCCCEEEEECCHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHC
PTRSETDLLTRHAADIAATIGPGRAVVELGSGSSTKTPLLLAAIDPAAYVPVDISGDFLR
CCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCHHHH
DSAEALAARFPRLPVYPVEADFTQKVALPREICALPKLGFFPGSTIGNMVARTAVDLLRN
HHHHHHHHHCCCCCEEECCCCCHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
WRAALGDGSLMLIGIDRIKDIAVLERAYDDPAGVTAAFNLNLIERINRELGGDMALDNFT
HHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCEECCCCH
HRAVWNDTHARIEMHLVAMCDMDFTVDGQAYHMAKGETIHSENSHKYGPRDANLLLRAGG
HHHEECCCHHEEEEEEEEEECCCEEECCCEEEEECCCEECCCCCCCCCCCCCCEEEEECC
WTPIATWDDADPAFALILAEATEFRSAP
CCEECCCCCCCCEEEEEEEHHHHHCCCC
>Mature Secondary Structure 
GVVRQLRQISEDDTGVDVAFRADVHAGLSQTPKAIPARWFYDTTGSALFEDITALPEYY
CHHHHHHHHCCCCCCCEEEEECCHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHC
PTRSETDLLTRHAADIAATIGPGRAVVELGSGSSTKTPLLLAAIDPAAYVPVDISGDFLR
CCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCHHHH
DSAEALAARFPRLPVYPVEADFTQKVALPREICALPKLGFFPGSTIGNMVARTAVDLLRN
HHHHHHHHHCCCCCEEECCCCCHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
WRAALGDGSLMLIGIDRIKDIAVLERAYDDPAGVTAAFNLNLIERINRELGGDMALDNFT
HHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCEECCCCH
HRAVWNDTHARIEMHLVAMCDMDFTVDGQAYHMAKGETIHSENSHKYGPRDANLLLRAGG
HHHEECCCHHEEEEEEEEEECCCEEECCCEEEEECCCEECCCCCCCCCCCCCCEEEEECC
WTPIATWDDADPAFALILAEATEFRSAP
CCEECCCCCCCCEEEEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA