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The map label for this gene is 103488516

Identifier: 103488516

GI number: 103488516

Start: 3186803

End: 3188182

Strand: Reverse

Name: 103488516

Synonym: Sala_3040

Alternate gene names: NA

Gene position: 3188182-3186803 (Counterclockwise)

Preceding gene: 103488519

Following gene: 103488515

Centisome position: 95.31

GC content: 67.46

Gene sequence:

>1380_bases
ATGCGTTGCACTCCATGGATAGCCGCGCTTTTGCTGGCCCTTGCGCTGCCTTGCGCGCCGCTCGCCGCCGCCGAAGCGAC
GCCGCGCGCCTTCCCCGGCGCGGTCGGTCCGGCGGCCGAAACTCCCGGCGGGCGCGGCGGCAAGATCCTGCGCGTGACGA
CGCTGGCCGCCGACGGGCCGGGGTCGCTCAAGGCCGCGATCGACACGCCGGGACCGCGCATCATCGTTTTCGAGGTCGGC
GGCGTGATCGACATGGGGCGCCAGCCCGTTGAGATCAAACACCCCTATCTGACGATCGCGGGGCAAACCGCGCCCGGCCC
CGGCATCACGCTGATCCGCACCGGCATCGACGTGAAGACACACGACGTCATCCTGCGCCACCTGCGCGTCTATACCGGCG
TCGATGGCCAGCCGAAGCGCAGCGGGTGGGAGGCCGACGCCCTTTCGACCGTCGCCGCGCACAATGTCATCGTCGATCAT
TGCACCTTCCTGTGGGCGATCGACGAAAATATGTCGGCGTCGGGGCCGCGCTTCACCGGCAATACGGTCGAGGAATGGCG
CGCTGGGACAAGCCGCAACATCACCTTTTCGAACAATCTCGCCGCCGAGGGTCTTGCCGATGCGAGCCACCCCAAGGGCG
AGCACAGCAAGGGGTCGCTGGTCCACGACAATGCCACCGGCATCGTGTTTTACCGCAATCTCTGGGCGCATAATGTCGAG
CGCAACCCGCTGGTGAAGGGCGGCGCGCGGGTGCTGATGATCAACAATCTGATCTACAACCCCAAGCACCGCGCGGTGCA
TTACAACCTGATGGACCTTGAGTGGACCGGGCACGACCATGTCACGGGCCAGATCACCGCGATCGGCAATGTCATGCGCG
GCGGCAACGACACCGACGAGGGTCTGCCCTTTCTGATGCTCGGCGGCGACGGCGACCTGGAGTTTTATGGAAAGGACAAT
CTGGCGGTCGACCGCCACGGCAAGGCGCTGCCCGAATTCGGCCGCTATGGCGAAACGCGCGCCGCGCTGATCCGCGCCAG
GGCGCCGCTCGCGGCCGTCGATGGCTACCGCATCCTGCCGGTGCGCGATGTCGAAACGTCGGTGCTGGCGAGCGCGGGCG
CGCGCCCGTGGGCGCGCGATGCAGAAGAGATTCGCGTGCTCTTCTTCGTTGCCGAAGGGCGCGGCGCGATCATCGACGAC
GAAAAGGAAGTGAGCGCCTATCCGGCGGTCAAGCCGCCAGTGCGCGCGCCCTTTGTCGAAGGCGACTGGGATCTGGCGAC
GATGGAGCCCCGGTCGGGCCGCTATCCGGGGCAGACCGCCCCCATGCCGCAGGAACATCTGTCGGCGCGCGACCGCGCCT
CGCGCGGCGAAGCGCCATGA

Upstream 100 bases:

>100_bases
CTGGAATGATTTTCTCGTTGACCGATTGGGGTAACCGGTGTCAGAAAGATTGAAGGATAGGCGACGCCCTGTCAAGACCC
AAAGAACAAGGGAGAGAATG

Downstream 100 bases:

>100_bases
GCGCGCTGCTCGCCATATTGCTCGCGGGCGCCGGCGCCGCCCCTGCGATGGTCGTGATCGACGAAGCGGCGACGGTGCGC
GAGGAAGCGCCGCCGCACGG

Product: pectate lyase

Products: NA

Alternate protein names: Pectinesterase; Pectate Lyase Protein; Fibronectin Type III Domain-Containing Protein; Polysaccharide Lyase Family; Outer Membrane Adhesin Like Proteiin; 50S Ribosomal Protein L; Pectate Lysase; Ricin B Lectin; PKD Domain Containing Protein; Pectate Lyase/Amb Allergen

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MRCTPWIAALLLALALPCAPLAAAEATPRAFPGAVGPAAETPGGRGGKILRVTTLAADGPGSLKAAIDTPGPRIIVFEVG
GVIDMGRQPVEIKHPYLTIAGQTAPGPGITLIRTGIDVKTHDVILRHLRVYTGVDGQPKRSGWEADALSTVAAHNVIVDH
CTFLWAIDENMSASGPRFTGNTVEEWRAGTSRNITFSNNLAAEGLADASHPKGEHSKGSLVHDNATGIVFYRNLWAHNVE
RNPLVKGGARVLMINNLIYNPKHRAVHYNLMDLEWTGHDHVTGQITAIGNVMRGGNDTDEGLPFLMLGGDGDLEFYGKDN
LAVDRHGKALPEFGRYGETRAALIRARAPLAAVDGYRILPVRDVETSVLASAGARPWARDAEEIRVLFFVAEGRGAIIDD
EKEVSAYPAVKPPVRAPFVEGDWDLATMEPRSGRYPGQTAPMPQEHLSARDRASRGEAP

Sequences:

>Translated_459_residues
MRCTPWIAALLLALALPCAPLAAAEATPRAFPGAVGPAAETPGGRGGKILRVTTLAADGPGSLKAAIDTPGPRIIVFEVG
GVIDMGRQPVEIKHPYLTIAGQTAPGPGITLIRTGIDVKTHDVILRHLRVYTGVDGQPKRSGWEADALSTVAAHNVIVDH
CTFLWAIDENMSASGPRFTGNTVEEWRAGTSRNITFSNNLAAEGLADASHPKGEHSKGSLVHDNATGIVFYRNLWAHNVE
RNPLVKGGARVLMINNLIYNPKHRAVHYNLMDLEWTGHDHVTGQITAIGNVMRGGNDTDEGLPFLMLGGDGDLEFYGKDN
LAVDRHGKALPEFGRYGETRAALIRARAPLAAVDGYRILPVRDVETSVLASAGARPWARDAEEIRVLFFVAEGRGAIIDD
EKEVSAYPAVKPPVRAPFVEGDWDLATMEPRSGRYPGQTAPMPQEHLSARDRASRGEAP
>Mature_459_residues
MRCTPWIAALLLALALPCAPLAAAEATPRAFPGAVGPAAETPGGRGGKILRVTTLAADGPGSLKAAIDTPGPRIIVFEVG
GVIDMGRQPVEIKHPYLTIAGQTAPGPGITLIRTGIDVKTHDVILRHLRVYTGVDGQPKRSGWEADALSTVAAHNVIVDH
CTFLWAIDENMSASGPRFTGNTVEEWRAGTSRNITFSNNLAAEGLADASHPKGEHSKGSLVHDNATGIVFYRNLWAHNVE
RNPLVKGGARVLMINNLIYNPKHRAVHYNLMDLEWTGHDHVTGQITAIGNVMRGGNDTDEGLPFLMLGGDGDLEFYGKDN
LAVDRHGKALPEFGRYGETRAALIRARAPLAAVDGYRILPVRDVETSVLASAGARPWARDAEEIRVLFFVAEGRGAIIDD
EKEVSAYPAVKPPVRAPFVEGDWDLATMEPRSGRYPGQTAPMPQEHLSARDRASRGEAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.2.2

Molecular weight: Translated: 49292; Mature: 49292

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCTPWIAALLLALALPCAPLAAAEATPRAFPGAVGPAAETPGGRGGKILRVTTLAADGP
CCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
GSLKAAIDTPGPRIIVFEVGGVIDMGRQPVEIKHPYLTIAGQTAPGPGITLIRTGIDVKT
CCEEEEEECCCCEEEEEECCCEECCCCCCEEEECCEEEEECCCCCCCCEEEEEECCCCCH
HDVILRHLRVYTGVDGQPKRSGWEADALSTVAAHNVIVDHCTFLWAIDENMSASGPRFTG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCC
NTVEEWRAGTSRNITFSNNLAAEGLADASHPKGEHSKGSLVHDNATGIVFYRNLWAHNVE
CCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEHHHCCCC
RNPLVKGGARVLMINNLIYNPKHRAVHYNLMDLEWTGHDHVTGQITAIGNVMRGGNDTDE
CCCCCCCCEEEEEEECEEECCCCCEEEEEEEEEEECCCCCCEEEEEEEEHHHCCCCCCCC
GLPFLMLGGDGDLEFYGKDNLAVDRHGKALPEFGRYGETRAALIRARAPLAAVDGYRILP
CCCEEEECCCCCEEEEECCCEEECCCCCCCHHHHCCCCHHHHHHHHCCCEEECCCEEEEE
VRDVETSVLASAGARPWARDAEEIRVLFFVAEGRGAIIDDEKEVSAYPAVKPPVRAPFVE
ECCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEECCCHHHCCCCCCCCCCCCCEEC
GDWDLATMEPRSGRYPGQTAPMPQEHLSARDRASRGEAP
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRCTPWIAALLLALALPCAPLAAAEATPRAFPGAVGPAAETPGGRGGKILRVTTLAADGP
CCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
GSLKAAIDTPGPRIIVFEVGGVIDMGRQPVEIKHPYLTIAGQTAPGPGITLIRTGIDVKT
CCEEEEEECCCCEEEEEECCCEECCCCCCEEEECCEEEEECCCCCCCCEEEEEECCCCCH
HDVILRHLRVYTGVDGQPKRSGWEADALSTVAAHNVIVDHCTFLWAIDENMSASGPRFTG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCC
NTVEEWRAGTSRNITFSNNLAAEGLADASHPKGEHSKGSLVHDNATGIVFYRNLWAHNVE
CCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEHHHCCCC
RNPLVKGGARVLMINNLIYNPKHRAVHYNLMDLEWTGHDHVTGQITAIGNVMRGGNDTDE
CCCCCCCCEEEEEEECEEECCCCCEEEEEEEEEEECCCCCCEEEEEEEEHHHCCCCCCCC
GLPFLMLGGDGDLEFYGKDNLAVDRHGKALPEFGRYGETRAALIRARAPLAAVDGYRILP
CCCEEEECCCCCEEEEECCCEEECCCCCCCHHHHCCCCHHHHHHHHCCCEEECCCEEEEE
VRDVETSVLASAGARPWARDAEEIRVLFFVAEGRGAIIDDEKEVSAYPAVKPPVRAPFVE
ECCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEECCCHHHCCCCCCCCCCCCCEEC
GDWDLATMEPRSGRYPGQTAPMPQEHLSARDRASRGEAP
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA