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The map label for this gene is ydbT [H]

Identifier: 103488492

GI number: 103488492

Start: 3157626

End: 3159353

Strand: Reverse

Name: ydbT [H]

Synonym: Sala_3015

Alternate gene names: 103488492

Gene position: 3159353-3157626 (Counterclockwise)

Preceding gene: 103488493

Following gene: 103488491

Centisome position: 94.45

GC content: 68.46

Gene sequence:

>1728_bases
ATGGCTGTTTCGCACCGACACGATCGTCCCCTTCGTGCGCGTCCAGCATATCGACGTCGGGCAGGGGCCGATCGAACGCT
GGTTCGGCCTGTCGCACCTGATCGTCCACACGTCGGGCACGCACAACAGCACGGTCACGCTGCCCGGCCTGCCAGCCGAT
TTGGCCGCCGCGATGCGCGAGACGATCCGCCGCCATATCCAGACCGATTTTGCATGACCGAGGCCGCGACCGCGTTTCCC
CGAACCCGCGAAGCGACGGAGTGGCAGCGACTGCATCCCGCGACGCTCGCGCTCGCCATCGCCGGGCTGGGTCCCAAATC
GCTCAACCTGCTGCCCGCGGTCGCGGCGCTGGGCTTTACCGGCAACTGGCGGTGGATCGTCCCCGCGGTTCTGGCCTTCC
TGCTCATTTCGCTCACCGCCGCCTGGTTCCAGTGGCTGCGCTTCCGGTTCCTTGTCGGCGACGACGAGGTGCTGATCGAA
AGCGGCGTCTTCGCGCGCCAGCACCGGACCATCCCCTTCGACCGCATCCAGGACGTCAGCATCGAACAGGGCCTCGTCGC
GCGCGCGCTCGGCATCGCCAAGGTCGGATTTGAAACGGGGGCGGGCGGTCAGGAGAATGACGCCCATCTCGATTCGATCG
GGCTGGACGCGGCGCAGGCGCTGCGCGCGACGATCCGCGCGCACCGCAGCGGCACGGTCGCGGCGGCCACCGATGCTGCA
CTGGAAAGCGCGGTCGCCGACGAGGATCGGCTGCTCTTCACGATGGGGCCGTGGCGGCTGCTGATCGCCGGACTGTTCAA
TTTCTCGCTCGCCGCGCTCGCCGTTGTCGGCGCCGCGATGCAGTTTTTCGACGGGCTGCTGCCTTTCGATTTCAACATCT
TCAACCCGATGGACTGGATCGAACTTGCCGAGGATTACGGGCTCGACCAATGGCTGCTCGCGCATCGCTGGGTCGCGGGG
ATCGGCGCGGCGGCGTCGTTGCTCCTCATCGGCTTTGCAAGCGGCATCGCGACGATGATGTTCGCCAACTGGAACTTCCG
CCTGACGCGCGAGCCGCGTACGCTGCGCCGCACGCGGGGTTTGACGACGCGCACCGATGTCGCGCTGCCCATCCGGCGCG
TGCAGGCGGCGATCCTGATCACCGGCTGGTTTCGTCGCCGGTTCGGCTGGCACGAACTGAGGCTCCAGAGCCTCGCGAGC
GATGGCGAGAAGGAGCGCGACCATCAGATCGTCCCCTTTGGTCGCTTCGCCGAAATCGACCCGATCCTCGCCGAAGTCGG
CATCGCACGGCCCGACGAGGCCGCCGGCTGGCACCAGAGCCACGGTGTCGTCGCGCTCGGCGGGCTCATCGGCGCGCTGT
TCGCTGCAATCGGCGGACTGGTCGCGACCGCGCTCGGCCAGCCGCTCGGCGCGCTGGGGATCGTCGCGGGCGCGCTGATC
GCCGCTGCGTCGCTCTTTGGCGCGCGCTTCCATCGCTGGGCCGATCTTGGCGATCAACTCGCCATCCGTCGCGGCTGGTG
GAAGCCGCGCACGACGCTGCTCCCGCACGCCTCGGTGCAAAGCATCGACCTCAAGACCGATTTCATTCAGCGCCCGCTCG
GCCTTGCGACGCTGGTGTTCGGCGTGCCGGGGGGCAGCGCGCTCGCGGCGCACGAGATTCCGGCGATCCCGGTGATGACA
GCGCGCAAGCTGCGCGCGCGGATCCTTGCCGCACGGAGTCGGCGATGA

Upstream 100 bases:

>100_bases
CGTGGCTCGTGGCGATCGTCACGATCCTCACCTTTCCCTCGCGCCGCGTCGCGCGCTGGGGCTACCGGATCGGCGACGGG
CAGCTGCGCGTCGCGCGCGG

Downstream 100 bases:

>100_bases
GCGAGGCGGCACTGGGAATCACCTGCTCGATCGCGGGCCAGTCGTGGCGCTGGCGGCGTGCGAGCGCCGACATGGCGGCG
GAAAATCTCGCGCCCGACGA

Product: membrane-flanked domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MAVSHRHDRPLRARPAYRRRAGADRTLVRPVAPDRPHVGHAQQHGHAARPASRFGRRDARDDPPPYPDRFCMTEAATAFP
RTREATEWQRLHPATLALAIAGLGPKSLNLLPAVAALGFTGNWRWIVPAVLAFLLISLTAAWFQWLRFRFLVGDDEVLIE
SGVFARQHRTIPFDRIQDVSIEQGLVARALGIAKVGFETGAGGQENDAHLDSIGLDAAQALRATIRAHRSGTVAAATDAA
LESAVADEDRLLFTMGPWRLLIAGLFNFSLAALAVVGAAMQFFDGLLPFDFNIFNPMDWIELAEDYGLDQWLLAHRWVAG
IGAAASLLLIGFASGIATMMFANWNFRLTREPRTLRRTRGLTTRTDVALPIRRVQAAILITGWFRRRFGWHELRLQSLAS
DGEKERDHQIVPFGRFAEIDPILAEVGIARPDEAAGWHQSHGVVALGGLIGALFAAIGGLVATALGQPLGALGIVAGALI
AAASLFGARFHRWADLGDQLAIRRGWWKPRTTLLPHASVQSIDLKTDFIQRPLGLATLVFGVPGGSALAAHEIPAIPVMT
ARKLRARILAARSRR

Sequences:

>Translated_575_residues
MAVSHRHDRPLRARPAYRRRAGADRTLVRPVAPDRPHVGHAQQHGHAARPASRFGRRDARDDPPPYPDRFCMTEAATAFP
RTREATEWQRLHPATLALAIAGLGPKSLNLLPAVAALGFTGNWRWIVPAVLAFLLISLTAAWFQWLRFRFLVGDDEVLIE
SGVFARQHRTIPFDRIQDVSIEQGLVARALGIAKVGFETGAGGQENDAHLDSIGLDAAQALRATIRAHRSGTVAAATDAA
LESAVADEDRLLFTMGPWRLLIAGLFNFSLAALAVVGAAMQFFDGLLPFDFNIFNPMDWIELAEDYGLDQWLLAHRWVAG
IGAAASLLLIGFASGIATMMFANWNFRLTREPRTLRRTRGLTTRTDVALPIRRVQAAILITGWFRRRFGWHELRLQSLAS
DGEKERDHQIVPFGRFAEIDPILAEVGIARPDEAAGWHQSHGVVALGGLIGALFAAIGGLVATALGQPLGALGIVAGALI
AAASLFGARFHRWADLGDQLAIRRGWWKPRTTLLPHASVQSIDLKTDFIQRPLGLATLVFGVPGGSALAAHEIPAIPVMT
ARKLRARILAARSRR
>Mature_574_residues
AVSHRHDRPLRARPAYRRRAGADRTLVRPVAPDRPHVGHAQQHGHAARPASRFGRRDARDDPPPYPDRFCMTEAATAFPR
TREATEWQRLHPATLALAIAGLGPKSLNLLPAVAALGFTGNWRWIVPAVLAFLLISLTAAWFQWLRFRFLVGDDEVLIES
GVFARQHRTIPFDRIQDVSIEQGLVARALGIAKVGFETGAGGQENDAHLDSIGLDAAQALRATIRAHRSGTVAAATDAAL
ESAVADEDRLLFTMGPWRLLIAGLFNFSLAALAVVGAAMQFFDGLLPFDFNIFNPMDWIELAEDYGLDQWLLAHRWVAGI
GAAASLLLIGFASGIATMMFANWNFRLTREPRTLRRTRGLTTRTDVALPIRRVQAAILITGWFRRRFGWHELRLQSLASD
GEKERDHQIVPFGRFAEIDPILAEVGIARPDEAAGWHQSHGVVALGGLIGALFAAIGGLVATALGQPLGALGIVAGALIA
AASLFGARFHRWADLGDQLAIRRGWWKPRTTLLPHASVQSIDLKTDFIQRPLGLATLVFGVPGGSALAAHEIPAIPVMTA
RKLRARILAARSRR

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 62815; Mature: 62684

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSHRHDRPLRARPAYRRRAGADRTLVRPVAPDRPHVGHAQQHGHAARPASRFGRRDAR
CCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCC
DDPPPYPDRFCMTEAATAFPRTREATEWQRLHPATLALAIAGLGPKSLNLLPAVAALGFT
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHCCC
GNWRWIVPAVLAFLLISLTAAWFQWLRFRFLVGDDEVLIESGVFARQHRTIPFDRIQDVS
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHCCCCCHHHHCCCC
IEQGLVARALGIAKVGFETGAGGQENDAHLDSIGLDAAQALRATIRAHRSGTVAAATDAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHH
LESAVADEDRLLFTMGPWRLLIAGLFNFSLAALAVVGAAMQFFDGLLPFDFNIFNPMDWI
HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ELAEDYGLDQWLLAHRWVAGIGAAASLLLIGFASGIATMMFANWNFRLTREPRTLRRTRG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCC
LTTRTDVALPIRRVQAAILITGWFRRRFGWHELRLQSLASDGEKERDHQIVPFGRFAEID
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCC
PILAEVGIARPDEAAGWHQSHGVVALGGLIGALFAAIGGLVATALGQPLGALGIVAGALI
HHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AAASLFGARFHRWADLGDQLAIRRGWWKPRTTLLPHASVQSIDLKTDFIQRPLGLATLVF
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEECCHHHHHHCCHHHHHHEE
GVPGGSALAAHEIPAIPVMTARKLRARILAARSRR
ECCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVSHRHDRPLRARPAYRRRAGADRTLVRPVAPDRPHVGHAQQHGHAARPASRFGRRDAR
CCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCC
DDPPPYPDRFCMTEAATAFPRTREATEWQRLHPATLALAIAGLGPKSLNLLPAVAALGFT
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHCCC
GNWRWIVPAVLAFLLISLTAAWFQWLRFRFLVGDDEVLIESGVFARQHRTIPFDRIQDVS
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHCCCCCHHHHCCCC
IEQGLVARALGIAKVGFETGAGGQENDAHLDSIGLDAAQALRATIRAHRSGTVAAATDAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHH
LESAVADEDRLLFTMGPWRLLIAGLFNFSLAALAVVGAAMQFFDGLLPFDFNIFNPMDWI
HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ELAEDYGLDQWLLAHRWVAGIGAAASLLLIGFASGIATMMFANWNFRLTREPRTLRRTRG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCC
LTTRTDVALPIRRVQAAILITGWFRRRFGWHELRLQSLASDGEKERDHQIVPFGRFAEID
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCC
PILAEVGIARPDEAAGWHQSHGVVALGGLIGALFAAIGGLVATALGQPLGALGIVAGALI
HHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AAASLFGARFHRWADLGDQLAIRRGWWKPRTTLLPHASVQSIDLKTDFIQRPLGLATLVF
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEECCHHHHHHCCHHHHHHEE
GVPGGSALAAHEIPAIPVMTARKLRARILAARSRR
ECCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]