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The map label for this gene is recJ [H]

Identifier: 103488491

GI number: 103488491

Start: 3155863

End: 3157629

Strand: Reverse

Name: recJ [H]

Synonym: Sala_3014

Alternate gene names: 103488491

Gene position: 3157629-3155863 (Counterclockwise)

Preceding gene: 103488492

Following gene: 103488489

Centisome position: 94.39

GC content: 71.82

Gene sequence:

>1767_bases
ATGAGCGAGGCGGCACTGGGAATCACCTGCTCGATCGCGGGCCAGTCGTGGCGCTGGCGGCGTGCGAGCGCCGACATGGC
GGCGGAAAATCTCGCGCCCGACGACCTTGTCACGCAATTGCTGCTCGCGCGCGGGGTGGCGCGCGACGATCTCGATCGCC
AGCGCACCCCGACCCTGCGCGGCTTCATGCCCGACCCGTCGCTGTTCCGCGACATGGATGCCGCCGCGGCGCGGCTCGCC
GATGCCGTCGAACGCCGGGAGGCGGTGACGATCTTCGGCGATTATGACGTCGACGGGGCGACATCGGCCGCGCTGCTCGT
CCGCCTGCTGCGGGCGCTCGGCACAACTGTCGGCGCCTATATCCCCGACCGTCTGATGGAAGGCTATGGCCCGTCGGGCG
CCGCGCTGGTGAAGATCGGCGAGGCGGGGTCGAAACTTATCGTCACCGTCGATTGCGGCGCACAGGCGTTCGAGGCGATC
GCCGAAGCCAATGCCGCCGGCGTCGAGGTGATCGTCGTCGACCATCACCAATGCGCGACCAGCCTGCCCGCCGCGCTTGC
GCTGGTGAACCCCAACCGGCTCGACGAGTCGCCCGACGCAGCGGTCCACGGCAATCTCGCCGCGGTCGGCGTCGCCTTCC
TGCTCGGCGCGGCGCTGCTTCGCACATTGCGCGCGCGCGGCTTTTTTGCGGGCCGCGAGGAACCCGCGCTGATCGAGCTT
CTGGACCTTGTCGCACTCGGCACCGTCGCCGACGTCGCGCGGCTCACCGGCTTCAATCGCGCGCTGGTGACGCAGGGGCT
GAAAGTGATGGCGCGGCGCGGCAATATCGGCCTCGCCGCGCTGATGGACGCGGCGCGGCTGACCAGGCCGCCGGGCGCAA
GCGACATGGGCTTCGCGCTCGGTCCGCGCATCAACGCGGGCGGGCGCGTCGGCAAGTCGGACCTCGGCGTGCGCCTGCTC
ACGACCGACGATCCGCAGGAAGCCGCCGATATCGCGCAGCAACTGTGCCGCCTCAACGAGGAGCGCCGCACGATCGAGGC
GGCGGTGCTCGACGAGGCGCTGGCGGCGAGCGCCGCGTGCGGCAACGCGCCCGTCGCGATTGTCGCCGGCGAAGGCTGGC
ACCCCGGCGTGATCGGCATCGTCGCCGGGCGGCTCAAGGAACGGTTGCACCGCCCCGCGATCGTGATCGCGGTGGACGCG
GACGGTATCGGCAAGGGATCGGGGCGCTCGATTTCGGGCGTCGACCTGGGCGCAGCCATTCTCGCCGCCAAGGAAACGGG
CTTGCTCGTCGCCGGCGGCGGCCATGCGATGGCGGCGGGACTCACGGTGGCCGCCGACCGGGTCGATGCGCTTGGCGCCT
TTTTGAGCGACCGCCTCGCCGCCGATGTCGAGCGCGCGAGCGGCGAGCGTGCGCTGCTGATCGACGCCGTGCTCGCGCCG
CGCGGGATCTCGCCGCTCTGGTGCGACGCGATCGAAAGCGCTGGCCCCTATGGCGCCGGTTGGCCCGCGCCGCGCGTCGC
GACGGGGCCGGTGCGAATCGTCGAATCGGGGATCGTCGGCACCGATCATGTCCGCCTGATCGTCGCGGGCGACGATGGCG
CGCGGTTCAAGGCGGTCGCCTTTCGCAGCGCCGAAACGGTGCTGGGCCAGACCCTGCTCGGCGCGCGGGGACGCAAGCTG
TGGCTCGCGGGCCGGGCAAAACGCGACGACTGGGGCAGCCGCCCCGCCGCCGAGCTGCACCTCGAGGATGCTGCCTGGGC
CGACTGA

Upstream 100 bases:

>100_bases
TGCCGGGGGGCAGCGCGCTCGCGGCGCACGAGATTCCGGCGATCCCGGTGATGACAGCGCGCAAGCTGCGCGCGCGGATC
CTTGCCGCACGGAGTCGGCG

Downstream 100 bases:

>100_bases
CCACGGACGTGCGCGCGGGTGCGCAACATTTTTGCGCCGCACCGACCGTCCCGCGCTTGACCGCGCGGGACGGCGCGTCT
AAGGCGCCGCTTCACCGATC

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MSEAALGITCSIAGQSWRWRRASADMAAENLAPDDLVTQLLLARGVARDDLDRQRTPTLRGFMPDPSLFRDMDAAAARLA
DAVERREAVTIFGDYDVDGATSAALLVRLLRALGTTVGAYIPDRLMEGYGPSGAALVKIGEAGSKLIVTVDCGAQAFEAI
AEANAAGVEVIVVDHHQCATSLPAALALVNPNRLDESPDAAVHGNLAAVGVAFLLGAALLRTLRARGFFAGREEPALIEL
LDLVALGTVADVARLTGFNRALVTQGLKVMARRGNIGLAALMDAARLTRPPGASDMGFALGPRINAGGRVGKSDLGVRLL
TTDDPQEAADIAQQLCRLNEERRTIEAAVLDEALAASAACGNAPVAIVAGEGWHPGVIGIVAGRLKERLHRPAIVIAVDA
DGIGKGSGRSISGVDLGAAILAAKETGLLVAGGGHAMAAGLTVAADRVDALGAFLSDRLAADVERASGERALLIDAVLAP
RGISPLWCDAIESAGPYGAGWPAPRVATGPVRIVESGIVGTDHVRLIVAGDDGARFKAVAFRSAETVLGQTLLGARGRKL
WLAGRAKRDDWGSRPAAELHLEDAAWAD

Sequences:

>Translated_588_residues
MSEAALGITCSIAGQSWRWRRASADMAAENLAPDDLVTQLLLARGVARDDLDRQRTPTLRGFMPDPSLFRDMDAAAARLA
DAVERREAVTIFGDYDVDGATSAALLVRLLRALGTTVGAYIPDRLMEGYGPSGAALVKIGEAGSKLIVTVDCGAQAFEAI
AEANAAGVEVIVVDHHQCATSLPAALALVNPNRLDESPDAAVHGNLAAVGVAFLLGAALLRTLRARGFFAGREEPALIEL
LDLVALGTVADVARLTGFNRALVTQGLKVMARRGNIGLAALMDAARLTRPPGASDMGFALGPRINAGGRVGKSDLGVRLL
TTDDPQEAADIAQQLCRLNEERRTIEAAVLDEALAASAACGNAPVAIVAGEGWHPGVIGIVAGRLKERLHRPAIVIAVDA
DGIGKGSGRSISGVDLGAAILAAKETGLLVAGGGHAMAAGLTVAADRVDALGAFLSDRLAADVERASGERALLIDAVLAP
RGISPLWCDAIESAGPYGAGWPAPRVATGPVRIVESGIVGTDHVRLIVAGDDGARFKAVAFRSAETVLGQTLLGARGRKL
WLAGRAKRDDWGSRPAAELHLEDAAWAD
>Mature_587_residues
SEAALGITCSIAGQSWRWRRASADMAAENLAPDDLVTQLLLARGVARDDLDRQRTPTLRGFMPDPSLFRDMDAAAARLAD
AVERREAVTIFGDYDVDGATSAALLVRLLRALGTTVGAYIPDRLMEGYGPSGAALVKIGEAGSKLIVTVDCGAQAFEAIA
EANAAGVEVIVVDHHQCATSLPAALALVNPNRLDESPDAAVHGNLAAVGVAFLLGAALLRTLRARGFFAGREEPALIELL
DLVALGTVADVARLTGFNRALVTQGLKVMARRGNIGLAALMDAARLTRPPGASDMGFALGPRINAGGRVGKSDLGVRLLT
TDDPQEAADIAQQLCRLNEERRTIEAAVLDEALAASAACGNAPVAIVAGEGWHPGVIGIVAGRLKERLHRPAIVIAVDAD
GIGKGSGRSISGVDLGAAILAAKETGLLVAGGGHAMAAGLTVAADRVDALGAFLSDRLAADVERASGERALLIDAVLAPR
GISPLWCDAIESAGPYGAGWPAPRVATGPVRIVESGIVGTDHVRLIVAGDDGARFKAVAFRSAETVLGQTLLGARGRKLW
LAGRAKRDDWGSRPAAELHLEDAAWAD

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=519, Percent_Identity=37.1868978805395, Blast_Score=270, Evalue=3e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 60839; Mature: 60708

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAALGITCSIAGQSWRWRRASADMAAENLAPDDLVTQLLLARGVARDDLDRQRTPTLR
CCCCCEEEEEEECCCCCEEECCCHHHHHHCCCHHHHHHHHHHHCCCCHHCCHHHCCCCCC
GFMPDPSLFRDMDAAAARLADAVERREAVTIFGDYDVDGATSAALLVRLLRALGTTVGAY
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IPDRLMEGYGPSGAALVKIGEAGSKLIVTVDCGAQAFEAIAEANAAGVEVIVVDHHQCAT
HHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEECHHHHH
SLPAALALVNPNRLDESPDAAVHGNLAAVGVAFLLGAALLRTLRARGFFAGREEPALIEL
CCCCEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LDLVALGTVADVARLTGFNRALVTQGLKVMARRGNIGLAALMDAARLTRPPGASDMGFAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC
GPRINAGGRVGKSDLGVRLLTTDDPQEAADIAQQLCRLNEERRTIEAAVLDEALAASAAC
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
GNAPVAIVAGEGWHPGVIGIVAGRLKERLHRPAIVIAVDADGIGKGSGRSISGVDLGAAI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCHHHHH
LAAKETGLLVAGGGHAMAAGLTVAADRVDALGAFLSDRLAADVERASGERALLIDAVLAP
EEECCCCEEEECCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCC
RGISPLWCDAIESAGPYGAGWPAPRVATGPVRIVESGIVGTDHVRLIVAGDDGARFKAVA
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCEEEEEECCCCCEEEEEE
FRSAETVLGQTLLGARGRKLWLAGRAKRDDWGSRPAAELHLEDAAWAD
EHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SEAALGITCSIAGQSWRWRRASADMAAENLAPDDLVTQLLLARGVARDDLDRQRTPTLR
CCCCEEEEEEECCCCCEEECCCHHHHHHCCCHHHHHHHHHHHCCCCHHCCHHHCCCCCC
GFMPDPSLFRDMDAAAARLADAVERREAVTIFGDYDVDGATSAALLVRLLRALGTTVGAY
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IPDRLMEGYGPSGAALVKIGEAGSKLIVTVDCGAQAFEAIAEANAAGVEVIVVDHHQCAT
HHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEECHHHHH
SLPAALALVNPNRLDESPDAAVHGNLAAVGVAFLLGAALLRTLRARGFFAGREEPALIEL
CCCCEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LDLVALGTVADVARLTGFNRALVTQGLKVMARRGNIGLAALMDAARLTRPPGASDMGFAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC
GPRINAGGRVGKSDLGVRLLTTDDPQEAADIAQQLCRLNEERRTIEAAVLDEALAASAAC
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
GNAPVAIVAGEGWHPGVIGIVAGRLKERLHRPAIVIAVDADGIGKGSGRSISGVDLGAAI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCHHHHH
LAAKETGLLVAGGGHAMAAGLTVAADRVDALGAFLSDRLAADVERASGERALLIDAVLAP
EEECCCCEEEECCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCC
RGISPLWCDAIESAGPYGAGWPAPRVATGPVRIVESGIVGTDHVRLIVAGDDGARFKAVA
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCEEEEEECCCCCEEEEEE
FRSAETVLGQTLLGARGRKLWLAGRAKRDDWGSRPAAELHLEDAAWAD
EHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]