Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488488

Identifier: 103488488

GI number: 103488488

Start: 3151728

End: 3152789

Strand: Reverse

Name: 103488488

Synonym: Sala_3011

Alternate gene names: NA

Gene position: 3152789-3151728 (Counterclockwise)

Preceding gene: 103488489

Following gene: 103488487

Centisome position: 94.25

GC content: 67.89

Gene sequence:

>1062_bases
ATGGCAAGGGCGATGACGACACCAACGACATGGCTGGAACAGGCGCGCGACGCGCACCGCCGTGGCGACGTCGCGGCGGA
GACGGCAGCGCTCGACGGCGCGATCCACGCCGACCGCGGCAATGTCGCCGCGCTGCTCGCCATGGCCGAACTCAAGCGGC
GGCTCGCCGACGACCGCGCAGCGGGCAGCTATTACCGCCTGGCGCTCACCACCGCCGTGCAGGCGCGCAGCGTCCCGCCG
GCGCTTCATCCCGGCCTTCAGCGCGCCGAGCAATTCCTCGCCGACACCGAGCGCGCCTTTGCCGACCATCTGCTCGGCCA
GCTACGAAGTGCGGGCATCGATACAAGGAACGCCGCGCCGCGTGTCGCCGAGGCGCTGCGAATGCTTGCGGGCGAACAGC
CGCTCTATCTGCAACAGCCGAGCATGTTCTATTTTCCGGGTCTCGCCCAGCGCCCCTTTTTCGAGCGGTCCGGTTTCGAT
TGGGCGGAAGCGGTCGAGGCGGCGACCGACGCGATCCGCGCCGAGTTGCTCGCGATGATCGACGGCGCGACCGATCCTTT
CGGACCCTATGTCACTACCGCCCCCGGTCGCCCGCCGCCGAACAACCCGCTGCTCGACAAGCCCGACTGGGGCGCCGCCT
GGCTCTGGAAGGATGGCGCGATCGCCGACGGCATGGCGGGTCTATGCCCCGCGACCCTCGCCGCGCTCGAACTGGCGCCG
CAGCCCGTCATCCCGAACCGCGCGCCGATCGCGCTCTTTTCGCGCCTCATGCCCGGTACGCATATCCAGTCGCACCACGG
GTTGCTCAATACGCGCCTGATCTGTCATCTGCCGCTGATCGTTCCCGATGGCTGCGGCCTGCGCGTCGGCGCCGAAACGC
GCGAATGGCGCGAAGGCGAGCTGATGATCTTCGACGACAGTTTCGAGCATGAGGCGTGGAACCACGGGGCGAGCGACCGC
ACCGTCCTGCTGTTCGAAATCTGGCGCCCCGACATCGATATCGACGAGCGCGAACAATTGACGCGCATCTTCGCGGCGAT
CGACACCTATGGCGAACAATAG

Upstream 100 bases:

>100_bases
GTCGAGTTCGACCAGGCGGGATCGAAACGCGTGCTCGACAGTTTCGTCCGCGCCGCCTGAACGCGCGGGCCCTCTGCTTG
CAAAGGCCGGGTGCCGCGTT

Downstream 100 bases:

>100_bases
ACAGGAACGGGAAGACGATGACCAACGCAGGCATGGACGCCGACATCTACGGCGCCTTTATCGAGCAGCTGCAACGCTAT
GTCCGCGAACGGCTGATCCC

Product: aspartyl/asparaginyl beta-hydroxylase

Products: NA

Alternate protein names: Beta-Hydroxylase; Peptide-Aspartate Beta-Dioxygenase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Beta-Hydroxylase Aspartyl/Asparaginyl Family Protein

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MARAMTTPTTWLEQARDAHRRGDVAAETAALDGAIHADRGNVAALLAMAELKRRLADDRAAGSYYRLALTTAVQARSVPP
ALHPGLQRAEQFLADTERAFADHLLGQLRSAGIDTRNAAPRVAEALRMLAGEQPLYLQQPSMFYFPGLAQRPFFERSGFD
WAEAVEAATDAIRAELLAMIDGATDPFGPYVTTAPGRPPPNNPLLDKPDWGAAWLWKDGAIADGMAGLCPATLAALELAP
QPVIPNRAPIALFSRLMPGTHIQSHHGLLNTRLICHLPLIVPDGCGLRVGAETREWREGELMIFDDSFEHEAWNHGASDR
TVLLFEIWRPDIDIDEREQLTRIFAAIDTYGEQ

Sequences:

>Translated_353_residues
MARAMTTPTTWLEQARDAHRRGDVAAETAALDGAIHADRGNVAALLAMAELKRRLADDRAAGSYYRLALTTAVQARSVPP
ALHPGLQRAEQFLADTERAFADHLLGQLRSAGIDTRNAAPRVAEALRMLAGEQPLYLQQPSMFYFPGLAQRPFFERSGFD
WAEAVEAATDAIRAELLAMIDGATDPFGPYVTTAPGRPPPNNPLLDKPDWGAAWLWKDGAIADGMAGLCPATLAALELAP
QPVIPNRAPIALFSRLMPGTHIQSHHGLLNTRLICHLPLIVPDGCGLRVGAETREWREGELMIFDDSFEHEAWNHGASDR
TVLLFEIWRPDIDIDEREQLTRIFAAIDTYGEQ
>Mature_352_residues
ARAMTTPTTWLEQARDAHRRGDVAAETAALDGAIHADRGNVAALLAMAELKRRLADDRAAGSYYRLALTTAVQARSVPPA
LHPGLQRAEQFLADTERAFADHLLGQLRSAGIDTRNAAPRVAEALRMLAGEQPLYLQQPSMFYFPGLAQRPFFERSGFDW
AEAVEAATDAIRAELLAMIDGATDPFGPYVTTAPGRPPPNNPLLDKPDWGAAWLWKDGAIADGMAGLCPATLAALELAPQ
PVIPNRAPIALFSRLMPGTHIQSHHGLLNTRLICHLPLIVPDGCGLRVGAETREWREGELMIFDDSFEHEAWNHGASDRT
VLLFEIWRPDIDIDEREQLTRIFAAIDTYGEQ

Specific function: Unknown

COG id: COG3555

COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI14589866, Length=209, Percent_Identity=33.0143540669856, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI258613943, Length=209, Percent_Identity=33.0143540669856, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI194328779, Length=216, Percent_Identity=31.0185185185185, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI38708313, Length=218, Percent_Identity=29.8165137614679, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193210571, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17568771, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI193210573, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24654024, Length=212, Percent_Identity=33.4905660377358, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38750; Mature: 38619

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAMTTPTTWLEQARDAHRRGDVAAETAALDGAIHADRGNVAALLAMAELKRRLADDRA
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHC
AGSYYRLALTTAVQARSVPPALHPGLQRAEQFLADTERAFADHLLGQLRSAGIDTRNAAP
CCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
RVAEALRMLAGEQPLYLQQPSMFYFPGLAQRPFFERSGFDWAEAVEAATDAIRAELLAMI
HHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DGATDPFGPYVTTAPGRPPPNNPLLDKPDWGAAWLWKDGAIADGMAGLCPATLAALELAP
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
QPVIPNRAPIALFSRLMPGTHIQSHHGLLNTRLICHLPLIVPDGCGLRVGAETREWREGE
CCCCCCCCHHHHHHHHCCCCCCCHHCCHHHCEEEEEEEEEECCCCCEEECCCCCCCCCCC
LMIFDDSFEHEAWNHGASDRTVLLFEIWRPDIDIDEREQLTRIFAAIDTYGEQ
EEEECCCCCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARAMTTPTTWLEQARDAHRRGDVAAETAALDGAIHADRGNVAALLAMAELKRRLADDRA
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHC
AGSYYRLALTTAVQARSVPPALHPGLQRAEQFLADTERAFADHLLGQLRSAGIDTRNAAP
CCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
RVAEALRMLAGEQPLYLQQPSMFYFPGLAQRPFFERSGFDWAEAVEAATDAIRAELLAMI
HHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DGATDPFGPYVTTAPGRPPPNNPLLDKPDWGAAWLWKDGAIADGMAGLCPATLAALELAP
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
QPVIPNRAPIALFSRLMPGTHIQSHHGLLNTRLICHLPLIVPDGCGLRVGAETREWREGE
CCCCCCCCHHHHHHHHCCCCCCCHHCCHHHCEEEEEEEEEECCCCCEEECCCCCCCCCCC
LMIFDDSFEHEAWNHGASDRTVLLFEIWRPDIDIDEREQLTRIFAAIDTYGEQ
EEEECCCCCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA