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The map label for this gene is 103488481

Identifier: 103488481

GI number: 103488481

Start: 3146992

End: 3147327

Strand: Direct

Name: 103488481

Synonym: Sala_3004

Alternate gene names: NA

Gene position: 3146992-3147327 (Clockwise)

Preceding gene: 103488480

Following gene: 103488486

Centisome position: 94.08

GC content: 64.58

Gene sequence:

>336_bases
GTGGAGGCGAAGGGGGTTATCATGGCGAACAGTCTGAAGTCGGCCCAATATCTGATCGAAAGCCGCCTGCTCGATGCGGC
GCGTGGCGACGCCAATGCCTATTTCGATCTCGGCATCGCATTTTCCACGGGGACCGGCGGGGTCGATGTCGACCTGGTCC
AGGCGCATAAATGGTTCAATCTTGCCGCGCTCGGCGGCAATATCGAAGGCCAGCAGTGCCGCGCCGACGTATCGAGCGAA
ATGTCGCAGGGCGAAATCGCCGAAGCGCAGCGCCAGGCACGCGCCTGGCTCGACGAGACGGCGCGCCGTCCGGCCGCGCG
GCGGTTCGTGGCGTAA

Upstream 100 bases:

>100_bases
GATTTCCAGGCGCTCGGCGCACTATCCACAAAAAATCGGGTCATCGTTAACGCTTTGTTGACCATAAACCGCAAGTTTGG
CCCCGAGGTCTCCATGTGGG

Downstream 100 bases:

>100_bases
ACAGGATCGCGCCTCTTCCCGTTCGCATCTCGACTTCGCTCGACACGAACGGAACAGGCAACTGGCTCAGCTCTTCCGCC
TGAAGGGCATATGCCCCTCC

Product: Sel1

Products: NA

Alternate protein names: Sel1 Domain Protein Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; Sel1-Like TPR Repeat Protein

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEAKGVIMANSLKSAQYLIESRLLDAARGDANAYFDLGIAFSTGTGGVDVDLVQAHKWFNLAALGGNIEGQQCRADVSSE
MSQGEIAEAQRQARAWLDETARRPAARRFVA

Sequences:

>Translated_111_residues
MEAKGVIMANSLKSAQYLIESRLLDAARGDANAYFDLGIAFSTGTGGVDVDLVQAHKWFNLAALGGNIEGQQCRADVSSE
MSQGEIAEAQRQARAWLDETARRPAARRFVA
>Mature_111_residues
MEAKGVIMANSLKSAQYLIESRLLDAARGDANAYFDLGIAFSTGTGGVDVDLVQAHKWFNLAALGGNIEGQQCRADVSSE
MSQGEIAEAQRQARAWLDETARRPAARRFVA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11974; Mature: 11974

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKGVIMANSLKSAQYLIESRLLDAARGDANAYFDLGIAFSTGTGGVDVDLVQAHKWFN
CCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEHHCCCCCCEE
LAALGGNIEGQQCRADVSSEMSQGEIAEAQRQARAWLDETARRPAARRFVA
EEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MEAKGVIMANSLKSAQYLIESRLLDAARGDANAYFDLGIAFSTGTGGVDVDLVQAHKWFN
CCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEHHCCCCCCEE
LAALGGNIEGQQCRADVSSEMSQGEIAEAQRQARAWLDETARRPAARRFVA
EEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA