| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488463
Identifier: 103488463
GI number: 103488463
Start: 3128632
End: 3128868
Strand: Direct
Name: 103488463
Synonym: Sala_2986
Alternate gene names: NA
Gene position: 3128632-3128868 (Clockwise)
Preceding gene: 103488462
Following gene: 103488464
Centisome position: 93.53
GC content: 66.24
Gene sequence:
>237_bases TTGCTCGACAAGACGCCGCTCGGCGTAACGGTACGGATTGCGCGCATCGACTGGACCGCCATGTCCGATGGCGAAGGACG GCGTCTGCGCGAGTTCGGCCTGATGGAAGGGTGCGAGGTGACCCCGCTCCACCGCGGCAGCATCTTTTCGCGCGATCCGC TCGCGCTCATCGTCGGACGCATGAAGGTCATCATCCGCGCGCGGCAGGCCGCCGCCATCGAAGTCGAACCCGCATGA
Upstream 100 bases:
>100_bases CGCTTCGTCGGACGGCTGCGCTATCCGGGGCGGTGACGCGGCAGCGATAAAGGACTGGCGCCGCGCTGCTGTTATTGATA ATCGCTCGCAAATGACTGCT
Downstream 100 bases:
>100_bases CCGCCGCCATCCCCTCGATCGCGCTCGTCGGCAATCCCAATGCCGGGAAATCGAGCCTGTTCAACGCGCTCACCGGCGCG CGGCAAAAGATCGCCAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MLDKTPLGVTVRIARIDWTAMSDGEGRRLREFGLMEGCEVTPLHRGSIFSRDPLALIVGRMKVIIRARQAAAIEVEPA
Sequences:
>Translated_78_residues MLDKTPLGVTVRIARIDWTAMSDGEGRRLREFGLMEGCEVTPLHRGSIFSRDPLALIVGRMKVIIRARQAAAIEVEPA >Mature_78_residues MLDKTPLGVTVRIARIDWTAMSDGEGRRLREFGLMEGCEVTPLHRGSIFSRDPLALIVGRMKVIIRARQAAAIEVEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8646; Mature: 8646
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKTPLGVTVRIARIDWTAMSDGEGRRLREFGLMEGCEVTPLHRGSIFSRDPLALIVGR CCCCCCCCEEEEEEEEEEEEECCCCCCEEHHCCCCCCCEECCCCCCCCCCCCCHHHHHHH MKVIIRARQAAAIEVEPA HHEEEEECCCEEEEEECC >Mature Secondary Structure MLDKTPLGVTVRIARIDWTAMSDGEGRRLREFGLMEGCEVTPLHRGSIFSRDPLALIVGR CCCCCCCCEEEEEEEEEEEEECCCCCCEEHHCCCCCCCEECCCCCCCCCCCCCHHHHHHH MKVIIRARQAAAIEVEPA HHEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA