Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is epr [H]

Identifier: 103488435

GI number: 103488435

Start: 3100469

End: 3101740

Strand: Direct

Name: epr [H]

Synonym: Sala_2958

Alternate gene names: 103488435

Gene position: 3100469-3101740 (Clockwise)

Preceding gene: 103488432

Following gene: 103488436

Centisome position: 92.68

GC content: 73.19

Gene sequence:

>1272_bases
ATGAGATATGTGATCGCAGCGCTGCTGACGCTTTGCTTCCTGTCCGGCGGGGTCATCCCGCGCGCCGCGGGGCAGGTTGC
GCTGCCGCCGGTCGGCCTCCCCGACAGGGGGCGGATCCTGCCGGGCCTTCCCGATCTCGCAGCCGAACCGCTCACCGTGG
CGGAGGACAAGCTGCGCACGCTGCGGCTTGACCGCATCGCCGCGCTGGTAAGGCGCCATCCGGATGCTATCGAACGCGAT
GCGCGCGGCGACCCCGCCGTGCGCGGCGTGCTCGTCGCCATCGGTGTCGACACCGCGATGGTCGCGCGCGCGCGCGCCGC
GGGCTTTGCGCTCATCGACCGCGAACGGCTCGATTCGCTGGGACTCGACATCGTGCGCTTTCGCGTGCCCGATGGTCGCA
GCCTTGCGCGTGCGCAAAAACAGCTCGCCCGTCTGTTGCCCGATGCCGAAGTCGACGTCGATCATATCTATTTCGCGAGC
GGGCCGGGCGGCGCTCTGCCGGGGGCGGCGCTTGTGGCGACGACGGGGGCGGGCGGCGGCGCCGCGCCGCTCGGCCTGAT
CGACGGCGGCGTGGCCGCGCATCCTTCGGTGGCGGGGCGCGTCGAACAAAGGGGATTTGCCCGCGGCGCGCCGACAGCCA
GCGAACATGGAACGGCGGTGGCCTCGCTGCTCGTCGGCGCAGGCGCGGTGCAGGGCGCGGCGCCGGGGCGGCGCCTGCTC
GCCGCCGACGTCTATGGCAACGATCCGGCGGGCGGCAGCGCCAGCGCGATCGCCCGCGCGCTCGGCTGGCTCGCGGCGCG
CCGCGTCGCGGTGACGACGATCAGCCTCGTCGGCCCCGACAACAAGCTGCTCGCGGCCGCAGTGGCGGCGGCGCAGCGCA
AGGGAATGCTGATCGTCGCGGCGGTGGGTAACGACGGGCCCGCCGCGCCCCCCGCCTACCCTGCCTCCTATCGCGGTGTG
CTCGCGGTTACCGGCGTCGATGCCAGGGCGCGCGTGCTTCCCGAAGCGGGGCGGGCGCTTCATGTCGACTTTGCGGCGCC
CGGCGACGCCGTGCGCGCGGCGACCGGCCCGGCCAGCATCGAACGGCTGCGCGGGACATCCTTTGCGGCGCCGCTCGTCG
CCGGGCGCCTCGCGCTTCACTATCCTGCCGCGTCGATCGCGGCGATCGGCCCGGCGATCACGGTGCTGGTGATGGAGGCG
CGCGACCTTGGCCGCAAGGGCCGTGACAAAATCTATGGTCATGGCCTGATCTGCGGCGATTGCGGCCGCTGA

Upstream 100 bases:

>100_bases
TTTCGATTGCCTGTGGACGAAACGATGTCCTTCTATCGTTTCTTCCCTATCGTGCTAATTTTTTCCGCGAAGGCGGGCCG
CGGCGGCCCGGAGAGACGAG

Downstream 100 bases:

>100_bases
TCACCTCTTACGCGATTTTTTTGGAAGAATATCCGACGCGCCATCGTTCTTGCAGCAGGCCCATCCCCTCCGGGCCCCAA
ATGCAGGAGTAGGACAATGG

Product: peptidase S8/S53 subtilisin kexin sedolisin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRYVIAALLTLCFLSGGVIPRAAGQVALPPVGLPDRGRILPGLPDLAAEPLTVAEDKLRTLRLDRIAALVRRHPDAIERD
ARGDPAVRGVLVAIGVDTAMVARARAAGFALIDRERLDSLGLDIVRFRVPDGRSLARAQKQLARLLPDAEVDVDHIYFAS
GPGGALPGAALVATTGAGGGAAPLGLIDGGVAAHPSVAGRVEQRGFARGAPTASEHGTAVASLLVGAGAVQGAAPGRRLL
AADVYGNDPAGGSASAIARALGWLAARRVAVTTISLVGPDNKLLAAAVAAAQRKGMLIVAAVGNDGPAAPPAYPASYRGV
LAVTGVDARARVLPEAGRALHVDFAAPGDAVRAATGPASIERLRGTSFAAPLVAGRLALHYPAASIAAIGPAITVLVMEA
RDLGRKGRDKIYGHGLICGDCGR

Sequences:

>Translated_423_residues
MRYVIAALLTLCFLSGGVIPRAAGQVALPPVGLPDRGRILPGLPDLAAEPLTVAEDKLRTLRLDRIAALVRRHPDAIERD
ARGDPAVRGVLVAIGVDTAMVARARAAGFALIDRERLDSLGLDIVRFRVPDGRSLARAQKQLARLLPDAEVDVDHIYFAS
GPGGALPGAALVATTGAGGGAAPLGLIDGGVAAHPSVAGRVEQRGFARGAPTASEHGTAVASLLVGAGAVQGAAPGRRLL
AADVYGNDPAGGSASAIARALGWLAARRVAVTTISLVGPDNKLLAAAVAAAQRKGMLIVAAVGNDGPAAPPAYPASYRGV
LAVTGVDARARVLPEAGRALHVDFAAPGDAVRAATGPASIERLRGTSFAAPLVAGRLALHYPAASIAAIGPAITVLVMEA
RDLGRKGRDKIYGHGLICGDCGR
>Mature_423_residues
MRYVIAALLTLCFLSGGVIPRAAGQVALPPVGLPDRGRILPGLPDLAAEPLTVAEDKLRTLRLDRIAALVRRHPDAIERD
ARGDPAVRGVLVAIGVDTAMVARARAAGFALIDRERLDSLGLDIVRFRVPDGRSLARAQKQLARLLPDAEVDVDHIYFAS
GPGGALPGAALVATTGAGGGAAPLGLIDGGVAAHPSVAGRVEQRGFARGAPTASEHGTAVASLLVGAGAVQGAAPGRRLL
AADVYGNDPAGGSASAIARALGWLAARRVAVTTISLVGPDNKLLAAAVAAAQRKGMLIVAAVGNDGPAAPPAYPASYRGV
LAVTGVDARARVLPEAGRALHVDFAAPGDAVRAATGPASIERLRGTSFAAPLVAGRLALHYPAASIAAIGPAITVLVMEA
RDLGRKGRDKIYGHGLICGDCGR

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500
- InterPro:   IPR009020
- InterPro:   IPR010259 [H]

Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 42789; Mature: 42789

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYVIAALLTLCFLSGGVIPRAAGQVALPPVGLPDRGRILPGLPDLAAEPLTVAEDKLRT
CHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LRLDRIAALVRRHPDAIERDARGDPAVRGVLVAIGVDTAMVARARAAGFALIDRERLDSL
HHHHHHHHHHHHCCHHHHHCCCCCHHHEEEEEEECCCHHHHHHHHHCCEEEECHHHHHHC
GLDIVRFRVPDGRSLARAQKQLARLLPDAEVDVDHIYFASGPGGALPGAALVATTGAGGG
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCC
AAPLGLIDGGVAAHPSVAGRVEQRGFARGAPTASEHGTAVASLLVGAGAVQGAAPGRRLL
CCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE
AADVYGNDPAGGSASAIARALGWLAARRVAVTTISLVGPDNKLLAAAVAAAQRKGMLIVA
EEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCEEEEE
AVGNDGPAAPPAYPASYRGVLAVTGVDARARVLPEAGRALHVDFAAPGDAVRAATGPASI
EECCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHH
ERLRGTSFAAPLVAGRLALHYPAASIAAIGPAITVLVMEARDLGRKGRDKIYGHGLICGD
HHHCCCCHHHHHHHHHHHEECCCHHHHHHHHHHEEEEEEHHHCCCCCCCCEEECCEEECC
CGR
CCC
>Mature Secondary Structure
MRYVIAALLTLCFLSGGVIPRAAGQVALPPVGLPDRGRILPGLPDLAAEPLTVAEDKLRT
CHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LRLDRIAALVRRHPDAIERDARGDPAVRGVLVAIGVDTAMVARARAAGFALIDRERLDSL
HHHHHHHHHHHHCCHHHHHCCCCCHHHEEEEEEECCCHHHHHHHHHCCEEEECHHHHHHC
GLDIVRFRVPDGRSLARAQKQLARLLPDAEVDVDHIYFASGPGGALPGAALVATTGAGGG
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCC
AAPLGLIDGGVAAHPSVAGRVEQRGFARGAPTASEHGTAVASLLVGAGAVQGAAPGRRLL
CCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE
AADVYGNDPAGGSASAIARALGWLAARRVAVTTISLVGPDNKLLAAAVAAAQRKGMLIVA
EEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCEEEEE
AVGNDGPAAPPAYPASYRGVLAVTGVDARARVLPEAGRALHVDFAAPGDAVRAATGPASI
EECCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHH
ERLRGTSFAAPLVAGRLALHYPAASIAAIGPAITVLVMEARDLGRKGRDKIYGHGLICGD
HHHCCCCHHHHHHHHHHHEECCCHHHHHHHHHHEEEEEEHHHCCCCCCCCEEECCEEECC
CGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2116590; 3142851; 7934828; 9384377 [H]