| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is linC [H]
Identifier: 103488342
GI number: 103488342
Start: 3016583
End: 3017839
Strand: Reverse
Name: linC [H]
Synonym: Sala_2865
Alternate gene names: 103488342
Gene position: 3017839-3016583 (Counterclockwise)
Preceding gene: 103488343
Following gene: 103488341
Centisome position: 90.21
GC content: 63.88
Gene sequence:
>1257_bases GTGGCCACCCAGATTCGCATCGCCCCCGAAACCGTCAATCCGCTCGACGTCAGCCGCGCCGAGCTGTGGAGCGAGGATCG CTGGCAGGAACCGATGCGCCAGTTGCGCGCCGAATCACCCATCTATTATTGCCCCGAATCGAAGTTCGGCCCCTATTGGT CGGTGACGACGTACAAACCGATCCAGCATATCGAGGCGCTGCCGAAGATTTTCTCCTCGAGCTGGGAATATGGCGGCATC ACCGTCGCCGGCGACGGGGTCGAGCATCTGAAAGAGGGCGAGATCCCGATGCCGATGTTCATCGCGATGGACCCGCCGCA GCACACCGCGCAGCGCCGCACCGTCGCCCCCGCCTTCGGTCCGTCGGAGATCGAGCGGATGCGCGCCGACACGCAGGCGC GCACCGCCGCGCTGATCGACACCCTGCCCGTCGGCGAGGCGTTCGACTGGGTCGAGAAAGTGTCGATCGAGCTGACCACC GACATGCTCGCGATCCTGTTCGACTTTCCCTGGGCCGACCGCCACAGGCTGACCGCCTGGTCCGACGCGCTCGGCGACAT CGAAAGCTTCAACACGCTCGAAGAACGGCAGGCGCGGCTCGCGACCGCCTTTGAAATGGGCGCGGCGTTCAAGGAGTTGT GGGACCACAAGGCCAGGAATCCGGGCAAGCACGACCTCATCTCGATCATGCTTCAGTCGGATGCGATGAGCCATATGAGC CATGAGGAGTTCATGGGGAATCTCATTCTGCTGATCGTCGGCGGCAACGACACGACGCGCAACTCGATGTCGGCCTATGC CTATGGCCTGCACTGCTTTCCCGAGGAACGCGCCAAGCTGGAGGCGAACCACGATCCCGAACTGGCGGTCAATGCGATGC ACGAGATCATCCGCTGGCAGACGCCGCTCGCGCACATGCGCCGCACCGCGATGGAGGACACCGAACTGTTCGGCCACCAG ATCAAGGCGCGCGACAAGATCGCGCTCTGGTATGCCTCGGCGAACCGCGACGAAAGCATCTTTCCCGACGGCGACCGCAT CATCGTCGACCGCGAAAATGCGCGCCGCCACCTTGCCTTCGGCTATGGCATCCACCGCTGCGTCGGCGCGCGCGTCGCCG AACTGCAGCTTACGACGCTGATTTCGGAGATGCAGAAGCGCCGCCTGCGCGTCAACGTCGTCGGCGAGCCCCAGCGCGTC CATGCGTGCTTCGTCCATGGCTATCGACACCTGCCGGTCGAACTCGAACGATATTGA
Upstream 100 bases:
>100_bases ACAAGGGGCGCCTGAAGTCCGTCGATTGACAAAGCTGTAAATAGTGGCATTCTGAAACGGAATCGGCCGCGCCGAGACGG CCACCCGAGAGGAGCTTTCC
Downstream 100 bases:
>100_bases CCGCGAGTGAAACCATGCGCCTGTTTCCGCCGTATAGGGGGGCAGGAGAGGTGACATGATTCCGCGACGTTATCTTCTGG GCGGTCTGGCGCTCGGCGGC
Product: linalool 8-monooxygenase
Products: NA
Alternate protein names: Cytochrome P450 111; Cytochrome P450lin [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MATQIRIAPETVNPLDVSRAELWSEDRWQEPMRQLRAESPIYYCPESKFGPYWSVTTYKPIQHIEALPKIFSSSWEYGGI TVAGDGVEHLKEGEIPMPMFIAMDPPQHTAQRRTVAPAFGPSEIERMRADTQARTAALIDTLPVGEAFDWVEKVSIELTT DMLAILFDFPWADRHRLTAWSDALGDIESFNTLEERQARLATAFEMGAAFKELWDHKARNPGKHDLISIMLQSDAMSHMS HEEFMGNLILLIVGGNDTTRNSMSAYAYGLHCFPEERAKLEANHDPELAVNAMHEIIRWQTPLAHMRRTAMEDTELFGHQ IKARDKIALWYASANRDESIFPDGDRIIVDRENARRHLAFGYGIHRCVGARVAELQLTTLISEMQKRRLRVNVVGEPQRV HACFVHGYRHLPVELERY
Sequences:
>Translated_418_residues MATQIRIAPETVNPLDVSRAELWSEDRWQEPMRQLRAESPIYYCPESKFGPYWSVTTYKPIQHIEALPKIFSSSWEYGGI TVAGDGVEHLKEGEIPMPMFIAMDPPQHTAQRRTVAPAFGPSEIERMRADTQARTAALIDTLPVGEAFDWVEKVSIELTT DMLAILFDFPWADRHRLTAWSDALGDIESFNTLEERQARLATAFEMGAAFKELWDHKARNPGKHDLISIMLQSDAMSHMS HEEFMGNLILLIVGGNDTTRNSMSAYAYGLHCFPEERAKLEANHDPELAVNAMHEIIRWQTPLAHMRRTAMEDTELFGHQ IKARDKIALWYASANRDESIFPDGDRIIVDRENARRHLAFGYGIHRCVGARVAELQLTTLISEMQKRRLRVNVVGEPQRV HACFVHGYRHLPVELERY >Mature_417_residues ATQIRIAPETVNPLDVSRAELWSEDRWQEPMRQLRAESPIYYCPESKFGPYWSVTTYKPIQHIEALPKIFSSSWEYGGIT VAGDGVEHLKEGEIPMPMFIAMDPPQHTAQRRTVAPAFGPSEIERMRADTQARTAALIDTLPVGEAFDWVEKVSIELTTD MLAILFDFPWADRHRLTAWSDALGDIESFNTLEERQARLATAFEMGAAFKELWDHKARNPGKHDLISIMLQSDAMSHMSH EEFMGNLILLIVGGNDTTRNSMSAYAYGLHCFPEERAKLEANHDPELAVNAMHEIIRWQTPLAHMRRTAMEDTELFGHQI KARDKIALWYASANRDESIFPDGDRIIVDRENARRHLAFGYGIHRCVGARVAELQLTTLISEMQKRRLRVNVVGEPQRVH ACFVHGYRHLPVELERY
Specific function: Catalyzes the 8-methyl hydroxylation of linalool [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.99.28 [H]
Molecular weight: Translated: 47834; Mature: 47703
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQIRIAPETVNPLDVSRAELWSEDRWQEPMRQLRAESPIYYCPESKFGPYWSVTTYKP CCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCH IQHIEALPKIFSSSWEYGGITVAGDGVEHLKEGEIPMPMFIAMDPPQHTAQRRTVAPAFG HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCC PSEIERMRADTQARTAALIDTLPVGEAFDWVEKVSIELTTDMLAILFDFPWADRHRLTAW HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH SDALGDIESFNTLEERQARLATAFEMGAAFKELWDHKARNPGKHDLISIMLQSDAMSHMS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HEEFMGNLILLIVGGNDTTRNSMSAYAYGLHCFPEERAKLEANHDPELAVNAMHEIIRWQ HHHHCCCEEEEEECCCCCCCCCHHHHEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHCC TPLAHMRRTAMEDTELFGHQIKARDKIALWYASANRDESIFPDGDRIIVDRENARRHLAF CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHH GYGIHRCVGARVAELQLTTLISEMQKRRLRVNVVGEPQRVHACFVHGYRHLPVELERY HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCEEECCC >Mature Secondary Structure ATQIRIAPETVNPLDVSRAELWSEDRWQEPMRQLRAESPIYYCPESKFGPYWSVTTYKP CCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCH IQHIEALPKIFSSSWEYGGITVAGDGVEHLKEGEIPMPMFIAMDPPQHTAQRRTVAPAFG HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCC PSEIERMRADTQARTAALIDTLPVGEAFDWVEKVSIELTTDMLAILFDFPWADRHRLTAW HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH SDALGDIESFNTLEERQARLATAFEMGAAFKELWDHKARNPGKHDLISIMLQSDAMSHMS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HEEFMGNLILLIVGGNDTTRNSMSAYAYGLHCFPEERAKLEANHDPELAVNAMHEIIRWQ HHHHCCCEEEEEECCCCCCCCCHHHHEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHCC TPLAHMRRTAMEDTELFGHQIKARDKIALWYASANRDESIFPDGDRIIVDRENARRHLAF CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHH GYGIHRCVGARVAELQLTTLISEMQKRRLRVNVVGEPQRVHACFVHGYRHLPVELERY HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8376348; 2295633; 3813557; 2578028; 1610873; 12237225 [H]