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The map label for this gene is msrB [H]

Identifier: 103488341

GI number: 103488341

Start: 3016042

End: 3016527

Strand: Reverse

Name: msrB [H]

Synonym: Sala_2864

Alternate gene names: 103488341

Gene position: 3016527-3016042 (Counterclockwise)

Preceding gene: 103488342

Following gene: 103488328

Centisome position: 90.18

GC content: 67.9

Gene sequence:

>486_bases
ATGATTCCGCGACGTTATCTTCTGGGCGGTCTGGCGCTCGGCGGCAGCATCATCGCCGCGCCGATGCTGTTCGCCAAATC
GGCGCGGCCCGGGGCGGAGCCGGGCTGGCGCCTGTCCGAAGCCGAGTGGAAAAAGCGCCTGTCGCCGCTGGAATATCGCG
TGCTGCGCGAGGCGGCGACCGAGCGCCCCTTCACCAGCCCGCTCGACAAGGAAAAGCGGGCCGGAACATTCGTCTGCGCG
GGCTGCGCGCTGCCGCTTTATTCGAGCAGGACCAAATATGACAGCGGCACCGGCTGGCCGAGTTTCTGGGCGCCGCTGAA
GGGCGCGATCGGCACCGCGACCGACCATGACCTCGGTTATCCGCGCACCGAGGTGCATTGCCGGCGCTGCGGCGGTCATC
TGGGCCATGTCTTCAACGACGGCCCGAAACCGACCGGCAAGCGTTATTGCATGAACGGCGCGGCGCTGCGCTTCCGCCCC
GCCTGA

Upstream 100 bases:

>100_bases
GTCCATGGCTATCGACACCTGCCGGTCGAACTCGAACGATATTGACCGCGAGTGAAACCATGCGCCTGTTTCCGCCGTAT
AGGGGGGCAGGAGAGGTGAC

Downstream 100 bases:

>100_bases
CGCGCTTTCACTCGGGCTTCACGCGCCAGAGCGCCAGCCCCGCGCGCGAGGTGATCGGCACCGCTTCGAGCCACGCCGGC
GGGGTTCCGGCATAAAGCTG

Product: protein-methionine-S-oxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MIPRRYLLGGLALGGSIIAAPMLFAKSARPGAEPGWRLSEAEWKKRLSPLEYRVLREAATERPFTSPLDKEKRAGTFVCA
GCALPLYSSRTKYDSGTGWPSFWAPLKGAIGTATDHDLGYPRTEVHCRRCGGHLGHVFNDGPKPTGKRYCMNGAALRFRP
A

Sequences:

>Translated_161_residues
MIPRRYLLGGLALGGSIIAAPMLFAKSARPGAEPGWRLSEAEWKKRLSPLEYRVLREAATERPFTSPLDKEKRAGTFVCA
GCALPLYSSRTKYDSGTGWPSFWAPLKGAIGTATDHDLGYPRTEVHCRRCGGHLGHVFNDGPKPTGKRYCMNGAALRFRP
A
>Mature_161_residues
MIPRRYLLGGLALGGSIIAAPMLFAKSARPGAEPGWRLSEAEWKKRLSPLEYRVLREAATERPFTSPLDKEKRAGTFVCA
GCALPLYSSRTKYDSGTGWPSFWAPLKGAIGTATDHDLGYPRTEVHCRRCGGHLGHVFNDGPKPTGKRYCMNGAALRFRP
A

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=125, Percent_Identity=48.8, Blast_Score=132, Evalue=9e-32,
Organism=Homo sapiens, GI301336162, Length=125, Percent_Identity=48.8, Blast_Score=132, Evalue=9e-32,
Organism=Homo sapiens, GI73089054, Length=125, Percent_Identity=48.8, Blast_Score=132, Evalue=9e-32,
Organism=Homo sapiens, GI37620216, Length=125, Percent_Identity=48.8, Blast_Score=132, Evalue=2e-31,
Organism=Homo sapiens, GI117606353, Length=132, Percent_Identity=46.2121212121212, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI1788077, Length=121, Percent_Identity=49.5867768595041, Blast_Score=123, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17553450, Length=125, Percent_Identity=41.6, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI115532676, Length=125, Percent_Identity=41.6, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6319816, Length=149, Percent_Identity=38.9261744966443, Blast_Score=103, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24645799, Length=162, Percent_Identity=44.4444444444444, Blast_Score=131, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24645801, Length=171, Percent_Identity=41.5204678362573, Blast_Score=128, Evalue=2e-30,
Organism=Drosophila melanogaster, GI45553335, Length=125, Percent_Identity=50.4, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI21356369, Length=125, Percent_Identity=50.4, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24645804, Length=134, Percent_Identity=46.2686567164179, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI221378664, Length=123, Percent_Identity=47.1544715447154, Blast_Score=124, Evalue=3e-29,
Organism=Drosophila melanogaster, GI221378662, Length=130, Percent_Identity=43.8461538461538, Blast_Score=123, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 17649; Mature: 17649

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRRYLLGGLALGGSIIAAPMLFAKSARPGAEPGWRLSEAEWKKRLSPLEYRVLREAAT
CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
ERPFTSPLDKEKRAGTFVCAGCALPLYSSRTKYDSGTGWPSFWAPLKGAIGTATDHDLGY
CCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
PRTEVHCRRCGGHLGHVFNDGPKPTGKRYCMNGAALRFRPA
CHHHHHHHHHCCHHCCCCCCCCCCCCCEEECCCCCEEEECC
>Mature Secondary Structure
MIPRRYLLGGLALGGSIIAAPMLFAKSARPGAEPGWRLSEAEWKKRLSPLEYRVLREAAT
CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
ERPFTSPLDKEKRAGTFVCAGCALPLYSSRTKYDSGTGWPSFWAPLKGAIGTATDHDLGY
CCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
PRTEVHCRRCGGHLGHVFNDGPKPTGKRYCMNGAALRFRPA
CHHHHHHHHHCCHHCCCCCCCCCCCCCEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA