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The map label for this gene is glf [C]

Identifier: 103488338

GI number: 103488338

Start: 3012207

End: 3013742

Strand: Direct

Name: glf [C]

Synonym: Sala_2861

Alternate gene names: 103488338

Gene position: 3012207-3013742 (Clockwise)

Preceding gene: 103488337

Following gene: 103488339

Centisome position: 90.05

GC content: 63.28

Gene sequence:

>1536_bases
ATGTCCGAAGCCCTTGGTTCACAAAACCACCCGACGAAGGTTGACGTGGCGATCATCGGCGCGGGACCGGCCGGCCTCAC
CGCCGCCTATCTGCTGACCAGGCAGGGCTATGGCGTGACGGTGATCGAAAAGGATCCGACCTATGTCGGCGGGATCAGCC
GCACGGTCGAACATGAGGGCTTTCGTTTCGACATCGGCGGGCACCGCTTTTTCTCCAAAAGCCGCGAAGTCGTCGATCTG
TGGAACGAGATTCTGCCCGACGACTTCATCGAGCGCCCGCGGATGAGCCGCATCTATTATGAGGGCAGGTTTTACAGTTA
TCCGCTGCGCGCGTTCGAGGCGCTGTGGAACCTCGGCGTCGTGCGGTCGACCTTGTGCATGATGAGCTACGCCAGGGCGA
AGCTGCTGCCGAAGAAGACGGTGCGCAGTTTCGAGGACTGGACGATCAACCAGTTCGGGAACAAGCTTTATTCGATCTTT
TTCAAGACCTATACCGAAAAGGTGTGGGGAATGCCGTGTGACGAAATGTCGGCCGACTGGGCGGCGCAGCGCATCAAGGG
GCTTTCGCTCGGCGGCGCAGTGATCGACGGGCTGAAACGCAGCCTGGGGCTCAACAAGAAGCCCAATGACGGCATGGCGA
CCAAGACCTTGCTCGAAACCTTCCGTTATCCGCGGCTCGGGCCGGGCATGATGTGGGAGGCGGCGGCGCGCAAGGTCGTG
GCGGGCGGCAATCATCTGCTGATGGGCCACAGCTTCAAGCAGCTGACGCAGGACCAGAAAACCGGGCGCTGGCGGATGAC
CGCGACCGGGCCCGACGGCGATGTCGTGATCGACGCGGGCCATGTCATCAGCTCGGCGCCGATGCGCGAACTGGCGGCGC
GCATCCATCCGCTCCCGGCCTGCGCGCTGACCGCGGCGCCCAAGCTCAATTACCGCGACTTCCTGACCGTCGCGCTCAAG
ATTCGGTCGGAGGATCTGTTCCCCGACAACTGGATCTATATCCACGACAGCCAGGTGCGGGTCGGCCGGGTGCAGAACTT
CCGCAGCTGGTCGCCCGAAATGGTCCCCGATCCGGCGATCGCCTGCGTCGGCCTCGAGTATTTCTGTTTCGAGGGCGACG
GACTCTGGTCGTCGAGCGACGCCGATCTCATCGCCCTGGCGACGAAGGAAATGGCGATCCTTGGCCTGTGCAAGGCCGAG
GATGTCGTCGGCGGCGCGGTGGTGCGGCAGGAAAAGGCCTATCCCGTCTATGACGATGACTATGCCGCGCATGTCGAGAC
GATGCGGTCCGAGCTGGAGGCGCGGTATCCGACGCTGCACATGGTCGGGCGGAACGGCATGCACCGCTATAACAACCAGG
ATCATGCGATGATGACGGCGATGCTGACCGTGCGCAACATCGTCGCCGGCGAGAAGCTTTACGACATCTGGGGCGTCAAC
GAGGACGCCGAATATCATGAAAGCGGCACCGAGGGTGAACGCGCCGCGCTGGCGTCGGTGCGCGACGTCCCGGCGCGCGT
CGCCAGGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCCTCCGCCAGCCCATAAACCCGGCGCCCTGTTAACCAGTTTTTATCCATGATTGGCCACAGCGGGGGTGCGCATGAATT
TGCCTGTGGGGAACAATCGA

Downstream 100 bases:

>100_bases
GCGTTTGGCCGGAGGGGCAGGCGCGATGCAATCCATGCTCAAGCTGATCGCATTGGTGCGCCGCCGCGAAGGGCGCTGGC
TCAACTATCTGCTTGCCAGC

Product: hypothetical protein

Products: UDP-D-galacto-1,4-furanose [C]

Alternate protein names: UDP-Galactopyranose Mutase; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Protoporphyrinogen Oxidase-Like Protein; Amine Oxidase Flavin-Containing Superfamily; Flavin Containing Amine Oxidoreductase; Amine Oxidase Family Protein; LOW QUALITY PROTEIN Protoporphyrinogen Oxidase; Oxidoreductase; Glycosyl Transferase Family 2 Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Flavin-Containing Amine Oxidoreductase Family Protein; Oxidase

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MSEALGSQNHPTKVDVAIIGAGPAGLTAAYLLTRQGYGVTVIEKDPTYVGGISRTVEHEGFRFDIGGHRFFSKSREVVDL
WNEILPDDFIERPRMSRIYYEGRFYSYPLRAFEALWNLGVVRSTLCMMSYARAKLLPKKTVRSFEDWTINQFGNKLYSIF
FKTYTEKVWGMPCDEMSADWAAQRIKGLSLGGAVIDGLKRSLGLNKKPNDGMATKTLLETFRYPRLGPGMMWEAAARKVV
AGGNHLLMGHSFKQLTQDQKTGRWRMTATGPDGDVVIDAGHVISSAPMRELAARIHPLPACALTAAPKLNYRDFLTVALK
IRSEDLFPDNWIYIHDSQVRVGRVQNFRSWSPEMVPDPAIACVGLEYFCFEGDGLWSSSDADLIALATKEMAILGLCKAE
DVVGGAVVRQEKAYPVYDDDYAAHVETMRSELEARYPTLHMVGRNGMHRYNNQDHAMMTAMLTVRNIVAGEKLYDIWGVN
EDAEYHESGTEGERAALASVRDVPARVARAA

Sequences:

>Translated_511_residues
MSEALGSQNHPTKVDVAIIGAGPAGLTAAYLLTRQGYGVTVIEKDPTYVGGISRTVEHEGFRFDIGGHRFFSKSREVVDL
WNEILPDDFIERPRMSRIYYEGRFYSYPLRAFEALWNLGVVRSTLCMMSYARAKLLPKKTVRSFEDWTINQFGNKLYSIF
FKTYTEKVWGMPCDEMSADWAAQRIKGLSLGGAVIDGLKRSLGLNKKPNDGMATKTLLETFRYPRLGPGMMWEAAARKVV
AGGNHLLMGHSFKQLTQDQKTGRWRMTATGPDGDVVIDAGHVISSAPMRELAARIHPLPACALTAAPKLNYRDFLTVALK
IRSEDLFPDNWIYIHDSQVRVGRVQNFRSWSPEMVPDPAIACVGLEYFCFEGDGLWSSSDADLIALATKEMAILGLCKAE
DVVGGAVVRQEKAYPVYDDDYAAHVETMRSELEARYPTLHMVGRNGMHRYNNQDHAMMTAMLTVRNIVAGEKLYDIWGVN
EDAEYHESGTEGERAALASVRDVPARVARAA
>Mature_510_residues
SEALGSQNHPTKVDVAIIGAGPAGLTAAYLLTRQGYGVTVIEKDPTYVGGISRTVEHEGFRFDIGGHRFFSKSREVVDLW
NEILPDDFIERPRMSRIYYEGRFYSYPLRAFEALWNLGVVRSTLCMMSYARAKLLPKKTVRSFEDWTINQFGNKLYSIFF
KTYTEKVWGMPCDEMSADWAAQRIKGLSLGGAVIDGLKRSLGLNKKPNDGMATKTLLETFRYPRLGPGMMWEAAARKVVA
GGNHLLMGHSFKQLTQDQKTGRWRMTATGPDGDVVIDAGHVISSAPMRELAARIHPLPACALTAAPKLNYRDFLTVALKI
RSEDLFPDNWIYIHDSQVRVGRVQNFRSWSPEMVPDPAIACVGLEYFCFEGDGLWSSSDADLIALATKEMAILGLCKAED
VVGGAVVRQEKAYPVYDDDYAAHVETMRSELEARYPTLHMVGRNGMHRYNNQDHAMMTAMLTVRNIVAGEKLYDIWGVNE
DAEYHESGTEGERAALASVRDVPARVARAA

Specific function: Involved In The Conversion Of UDP-Galp Into UDP-Galf Through A 2-Keto Intermediate. [C]

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71990307, Length=508, Percent_Identity=21.6535433070866, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.9 [C]

Molecular weight: Translated: 57087; Mature: 56956

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEALGSQNHPTKVDVAIIGAGPAGLTAAYLLTRQGYGVTVIEKDPTYVGGISRTVEHEG
CCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCEECCCHHHHCCCC
FRFDIGGHRFFSKSREVVDLWNEILPDDFIERPRMSRIYYEGRFYSYPLRAFEALWNLGV
EEEECCCCHHHHCCHHHHHHHHHHCCHHHHCCCCCCEEEECCEEEECHHHHHHHHHHHHH
VRSTLCMMSYARAKLLPKKTVRSFEDWTINQFGNKLYSIFFKTYTEKVWGMPCDEMSADW
HHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAQRIKGLSLGGAVIDGLKRSLGLNKKPNDGMATKTLLETFRYPRLGPGMMWEAAARKVV
HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AGGNHLLMGHSFKQLTQDQKTGRWRMTATGPDGDVVIDAGHVISSAPMRELAARIHPLPA
CCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHCCCHHHHHHHHHCCCCH
CALTAAPKLNYRDFLTVALKIRSEDLFPDNWIYIHDSQVRVGRVQNFRSWSPEMVPDPAI
HHHHCCCCCCCHHEEEEEEEEECCCCCCCCEEEEECCCEEEHHHHHHCCCCCCCCCCCCE
ACVGLEYFCFEGDGLWSSSDADLIALATKEMAILGLCKAEDVVGGAVVRQEKAYPVYDDD
EEECEEEEEEECCCCCCCCCCCEEEEEHHHHHEEEECCHHHHHCCHHHCCCCCCCCCCCC
YAAHVETMRSELEARYPTLHMVGRNGMHRYNNQDHAMMTAMLTVRNIVAGEKLYDIWGVN
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCC
EDAEYHESGTEGERAALASVRDVPARVARAA
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEALGSQNHPTKVDVAIIGAGPAGLTAAYLLTRQGYGVTVIEKDPTYVGGISRTVEHEG
CCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCEECCCHHHHCCCC
FRFDIGGHRFFSKSREVVDLWNEILPDDFIERPRMSRIYYEGRFYSYPLRAFEALWNLGV
EEEECCCCHHHHCCHHHHHHHHHHCCHHHHCCCCCCEEEECCEEEECHHHHHHHHHHHHH
VRSTLCMMSYARAKLLPKKTVRSFEDWTINQFGNKLYSIFFKTYTEKVWGMPCDEMSADW
HHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAQRIKGLSLGGAVIDGLKRSLGLNKKPNDGMATKTLLETFRYPRLGPGMMWEAAARKVV
HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AGGNHLLMGHSFKQLTQDQKTGRWRMTATGPDGDVVIDAGHVISSAPMRELAARIHPLPA
CCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHCCCHHHHHHHHHCCCCH
CALTAAPKLNYRDFLTVALKIRSEDLFPDNWIYIHDSQVRVGRVQNFRSWSPEMVPDPAI
HHHHCCCCCCCHHEEEEEEEEECCCCCCCCEEEEECCCEEEHHHHHHCCCCCCCCCCCCE
ACVGLEYFCFEGDGLWSSSDADLIALATKEMAILGLCKAEDVVGGAVVRQEKAYPVYDDD
EEECEEEEEEECCCCCCCCCCCEEEEEHHHHHEEEECCHHHHHCCHHHCCCCCCCCCCCC
YAAHVETMRSELEARYPTLHMVGRNGMHRYNNQDHAMMTAMLTVRNIVAGEKLYDIWGVN
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCC
EDAEYHESGTEGERAALASVRDVPARVARAA
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDPgalactose [C]

Specific reaction: UDPgalactose --> UDP-D-galacto-1,4-furanose [C]

General reaction: Group transfer (intramolecular Isomerization) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA