| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is coaE [H]
Identifier: 103488316
GI number: 103488316
Start: 2992094
End: 2992717
Strand: Reverse
Name: coaE [H]
Synonym: Sala_2839
Alternate gene names: 103488316
Gene position: 2992717-2992094 (Counterclockwise)
Preceding gene: 103488317
Following gene: 103488315
Centisome position: 89.46
GC content: 69.39
Gene sequence:
>624_bases ATGAGCCATTTCAAGCGCCCGCTCCTGCCGCTTCGCCGTCCCTTCCTGCTCGGCCTCACCGGCTCGATCGGCATGGGCAA ATCGACCGCGGCGGCGATGTTCGAGCGCGTGGGCGTCCCCGTCTTCGACGCCGACGCCGAGGTGCACCGATTGCAGGGTC CGGGCGGCGCGCTGGTCGCGGCGATCGAGGCACGCTTTCCGGGAACCACCGGCCCGCAGGGCGTCGACCGGCAGAAACTC GGTGCCCGCGTGCTCGGCAACACGCACGAGCTCGCCGCGCTTGAAGCGATCGTCCATCCGGCGGTTTTCCGGGCGCAGAA ACGCTTTCTCGCCCGGCACCGCGCGCGCGATGTCGTCGTGCTCGACATTCCCCTGTTGTTCGAAAAGGGCGGCTGGCGGC GCGTCGGCGCGATCGCCGTCGTCTCGGCGCCCGCATGGCTGCAGCGGCGGCGCGTGATGCGCCGCCCTGGCATGACCGCC GCGAAACTCAAGGCGATCCGCCGCCTCCAGGTGCCCGACCGCGTCAAGCGCGCGCGCGCCGATTTCATCATCGAGACGGG CCGCCCGAAAAGCGAAACACAGCGTCAGATTCGCTTCATCGCCTCTTGTTTCCACGCCCGATAG
Upstream 100 bases:
>100_bases TCGACATGCTGATCGGGCAGGCGGCGCTGGCCTTCGAACTCTTCTTCGGCGCGCCGCCGCCCGAGGGGCGCGACGACGAA CTGCGCGCGCTGCTGGTGGC
Downstream 100 bases:
>100_bases GGTCCAGATTATTATTTCGATGCGCGAGATTATCTTCGATACCGAAACCACGGGTTTCGATCCCAGGAACGGGGACCGGC TGGTCGAAATCGGATGTGTC
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSHFKRPLLPLRRPFLLGLTGSIGMGKSTAAAMFERVGVPVFDADAEVHRLQGPGGALVAAIEARFPGTTGPQGVDRQKL GARVLGNTHELAALEAIVHPAVFRAQKRFLARHRARDVVVLDIPLLFEKGGWRRVGAIAVVSAPAWLQRRRVMRRPGMTA AKLKAIRRLQVPDRVKRARADFIIETGRPKSETQRQIRFIASCFHAR
Sequences:
>Translated_207_residues MSHFKRPLLPLRRPFLLGLTGSIGMGKSTAAAMFERVGVPVFDADAEVHRLQGPGGALVAAIEARFPGTTGPQGVDRQKL GARVLGNTHELAALEAIVHPAVFRAQKRFLARHRARDVVVLDIPLLFEKGGWRRVGAIAVVSAPAWLQRRRVMRRPGMTA AKLKAIRRLQVPDRVKRARADFIIETGRPKSETQRQIRFIASCFHAR >Mature_206_residues SHFKRPLLPLRRPFLLGLTGSIGMGKSTAAAMFERVGVPVFDADAEVHRLQGPGGALVAAIEARFPGTTGPQGVDRQKLG ARVLGNTHELAALEAIVHPAVFRAQKRFLARHRARDVVVLDIPLLFEKGGWRRVGAIAVVSAPAWLQRRRVMRRPGMTAA KLKAIRRLQVPDRVKRARADFIIETGRPKSETQRQIRFIASCFHAR
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI110227607, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI110227605, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI110227603, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI110227601, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI205277394, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI191252797, Length=191, Percent_Identity=29.8429319371728, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI191252795, Length=191, Percent_Identity=29.8429319371728, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1786292, Length=175, Percent_Identity=27.4285714285714, Blast_Score=67, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17554944, Length=195, Percent_Identity=27.1794871794872, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6320402, Length=196, Percent_Identity=27.5510204081633, Blast_Score=75, Evalue=9e-15, Organism=Drosophila melanogaster, GI24658602, Length=199, Percent_Identity=30.6532663316583, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 22929; Mature: 22798
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFKRPLLPLRRPFLLGLTGSIGMGKSTAAAMFERVGVPVFDADAEVHRLQGPGGALVA CCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCHHEEECCCCCEEEE AIEARFPGTTGPQGVDRQKLGARVLGNTHELAALEAIVHPAVFRAQKRFLARHRARDVVV EEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LDIPLLFEKGGWRRVGAIAVVSAPAWLQRRRVMRRPGMTAAKLKAIRRLQVPDRVKRARA EEEHHEECCCCCEEECEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH DFIIETGRPKSETQRQIRFIASCFHAR CEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHFKRPLLPLRRPFLLGLTGSIGMGKSTAAAMFERVGVPVFDADAEVHRLQGPGGALVA CCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCHHEEECCCCCEEEE AIEARFPGTTGPQGVDRQKLGARVLGNTHELAALEAIVHPAVFRAQKRFLARHRARDVVV EEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LDIPLLFEKGGWRRVGAIAVVSAPAWLQRRRVMRRPGMTAAKLKAIRRLQVPDRVKRARA EEEHHEECCCCCEEECEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH DFIIETGRPKSETQRQIRFIASCFHAR CEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA