Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488158

Identifier: 103488158

GI number: 103488158

Start: 2826533

End: 2827177

Strand: Direct

Name: 103488158

Synonym: Sala_2681

Alternate gene names: NA

Gene position: 2826533-2827177 (Clockwise)

Preceding gene: 103488157

Following gene: 103488159

Centisome position: 84.5

GC content: 64.19

Gene sequence:

>645_bases
ATGTCCCGCGATAGCAATTTCCTGATTACCGAACTGGTCGGCGGACTCGAGCCGATACGACCGCTGCGCTTTTCAAGCGG
GCTTGGCTTCGCCCTGGCCGGGCTGGGCGTCACATTGGGGGCCGTCGCATGGCTGTTCGGATTTCGCACGGACGTGCTGG
CGGGCAACTTCGATCCGGTCTTCCTGCTTGCGGCCGGATTGTTCTTCCTGCTCGGTCTCGCGACCTCGGCGACCGTTGTC
GTCATGAGCCGGCCCCATATCGGCAGCGATCATAGCGGTTGGAGATGGGCCGCCGCCATGACGGCGCTGCTGCCGATTGC
CGCTATCCTGACGAGTCTCGAACGAGGCCGCATGGCTGTTTCCGCCGCAGATGCCGGACATGGTTTCGATTGCCTTGTCG
CCGGCAGCGCACTCGGCTTGCTGATCGCCGCGGTGCTGGTGTGGTGGTTGCGGCGCGGCGCCCCCACGTCGCCCGAGCGC
GCCGGACTGCTCACCGGAATCGCCGCAGGCAGCTTTGGCATGTTCGCCTTCTCTTTGCACTGCCAGTATAATGATATTAT
CCATATCGGACTGTGGCACGGCCTTGCCGTCGCGGCGACCGCAGGCCTGGGCAGACTCGTTATTCCGCGCCTGATCCGCT
GGTAG

Upstream 100 bases:

>100_bases
GAGGCATCCCTGGCCTGCGGGCAAAGCGAGTCCCTGATAAAAGTCAACATCCACCGTGGCCTGAAGAGATTGGCCGCGAT
GATCGAGAAAGCGTGAAAAC

Downstream 100 bases:

>100_bases
CGATCGGCGCACCAGCCGATGCCGGGCATGTGCTGAAAAATCTGGAAGAGCAGCTTGTCCGGTGCGATGAGCGGGAATGA
TGAGGGAGACAATCGCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSRDSNFLITELVGGLEPIRPLRFSSGLGFALAGLGVTLGAVAWLFGFRTDVLAGNFDPVFLLAAGLFFLLGLATSATVV
VMSRPHIGSDHSGWRWAAAMTALLPIAAILTSLERGRMAVSAADAGHGFDCLVAGSALGLLIAAVLVWWLRRGAPTSPER
AGLLTGIAAGSFGMFAFSLHCQYNDIIHIGLWHGLAVAATAGLGRLVIPRLIRW

Sequences:

>Translated_214_residues
MSRDSNFLITELVGGLEPIRPLRFSSGLGFALAGLGVTLGAVAWLFGFRTDVLAGNFDPVFLLAAGLFFLLGLATSATVV
VMSRPHIGSDHSGWRWAAAMTALLPIAAILTSLERGRMAVSAADAGHGFDCLVAGSALGLLIAAVLVWWLRRGAPTSPER
AGLLTGIAAGSFGMFAFSLHCQYNDIIHIGLWHGLAVAATAGLGRLVIPRLIRW
>Mature_213_residues
SRDSNFLITELVGGLEPIRPLRFSSGLGFALAGLGVTLGAVAWLFGFRTDVLAGNFDPVFLLAAGLFFLLGLATSATVVV
MSRPHIGSDHSGWRWAAAMTALLPIAAILTSLERGRMAVSAADAGHGFDCLVAGSALGLLIAAVLVWWLRRGAPTSPERA
GLLTGIAAGSFGMFAFSLHCQYNDIIHIGLWHGLAVAATAGLGRLVIPRLIRW

Specific function: Unknown

COG id: COG4944

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22478; Mature: 22346

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDSNFLITELVGGLEPIRPLRFSSGLGFALAGLGVTLGAVAWLFGFRTDVLAGNFDPV
CCCCCCCHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FLLAAGLFFLLGLATSATVVVMSRPHIGSDHSGWRWAAAMTALLPIAAILTSLERGRMAV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
SAADAGHGFDCLVAGSALGLLIAAVLVWWLRRGAPTSPERAGLLTGIAAGSFGMFAFSLH
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
CQYNDIIHIGLWHGLAVAATAGLGRLVIPRLIRW
ECCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SRDSNFLITELVGGLEPIRPLRFSSGLGFALAGLGVTLGAVAWLFGFRTDVLAGNFDPV
CCCCCCHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FLLAAGLFFLLGLATSATVVVMSRPHIGSDHSGWRWAAAMTALLPIAAILTSLERGRMAV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
SAADAGHGFDCLVAGSALGLLIAAVLVWWLRRGAPTSPERAGLLTGIAAGSFGMFAFSLH
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
CQYNDIIHIGLWHGLAVAATAGLGRLVIPRLIRW
ECCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA