| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488137
Identifier: 103488137
GI number: 103488137
Start: 2806724
End: 2807086
Strand: Direct
Name: 103488137
Synonym: Sala_2660
Alternate gene names: NA
Gene position: 2806724-2807086 (Clockwise)
Preceding gene: 103488130
Following gene: 103488138
Centisome position: 83.9
GC content: 63.64
Gene sequence:
>363_bases ATGACGGACCGCCGCGAGACTCTCTCCCGGCTCCAAGCCCGTCATGAAGCCACGGGCTTCCCTCTCCCTCTCAAGGCCTG CCAAAGGCAGGCCGGAACGCGGCCCGACGCTCCGCTACCGCCGGTCGGCATCAATGCTCTTGCCATTAAGTTCACTATTT GTTCTCATGTCGGCATGGAACGAATCGAACGACAGGAATTGTCCGCCATCCTGCTGGCGGCGCCCGGATGGGCGCGCGTC GGCCTGACGATGCCTGACGAGCGGATGCGCGAGCGGGCTGCCGATGCACTGGCGGCAACGATCATCGCGAAGCTCGACGG ATCATCCCCTCCCGACGTGAACCAGCTCAACCTTCCACTGTGA
Upstream 100 bases:
>100_bases CGGCGGACATTGGATTGGGACAGATGCAGGCGGTCGAACGGAATGTCGCGCGAGCCGCTGAGGACGAGCTTCTGGGGCGC TTTGGCCATGGGACTTCTCC
Downstream 100 bases:
>100_bases GCGGAGATGTGGGCCGCGCCGTGACGTCGAAGACGCCACGGCGAACGTCGAAACGCTCGGAGAAAGTGACGACATTAGTG CGACCCTCGCGATCGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTDRRETLSRLQARHEATGFPLPLKACQRQAGTRPDAPLPPVGINALAIKFTICSHVGMERIERQELSAILLAAPGWARV GLTMPDERMRERAADALAATIIAKLDGSSPPDVNQLNLPL
Sequences:
>Translated_120_residues MTDRRETLSRLQARHEATGFPLPLKACQRQAGTRPDAPLPPVGINALAIKFTICSHVGMERIERQELSAILLAAPGWARV GLTMPDERMRERAADALAATIIAKLDGSSPPDVNQLNLPL >Mature_119_residues TDRRETLSRLQARHEATGFPLPLKACQRQAGTRPDAPLPPVGINALAIKFTICSHVGMERIERQELSAILLAAPGWARVG LTMPDERMRERAADALAATIIAKLDGSSPPDVNQLNLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13045; Mature: 12914
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRRETLSRLQARHEATGFPLPLKACQRQAGTRPDAPLPPVGINALAIKFTICSHVGME CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RIERQELSAILLAAPGWARVGLTMPDERMRERAADALAATIIAKLDGSSPPDVNQLNLPL HHHHHHHHHHEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TDRRETLSRLQARHEATGFPLPLKACQRQAGTRPDAPLPPVGINALAIKFTICSHVGME CCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RIERQELSAILLAAPGWARVGLTMPDERMRERAADALAATIIAKLDGSSPPDVNQLNLPL HHHHHHHHHHEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA