Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is fecR [C]

Identifier: 103488009

GI number: 103488009

Start: 2665555

End: 2666544

Strand: Direct

Name: fecR [C]

Synonym: Sala_2530

Alternate gene names: 103488009

Gene position: 2665555-2666544 (Clockwise)

Preceding gene: 103488008

Following gene: 103488010

Centisome position: 79.68

GC content: 67.07

Gene sequence:

>990_bases
ATGACGAAGGCCGGCGACGACGATTATCCGGTCGACGAGGTTGCGCGGGCTTGGCTCGTCAAGATGCGCGGCGAGGATGC
GGAGGTGCTGCGCGGCGAATTCGACGCGTGGTTACAAGCATCTGCAGAACATCGCGAAGCCTATCGGCACGCCGAAAAGC
GGATGGCGGCGCTTGCGATCCTCAAGACGTCACAGCGCCACGGAACCACGCATGCCGAGGCGCGCCGCGGCCCGATGCGC
GGCTGGTTCACATGGGGAGCGGTCGCTACTGCGTTCGCGCTCCTGATCATCGCGATCGGGGCCGCGGGCGCCCCCTTTCC
CGGCCAGCCAGGCGGCGGCGCGACGGCTTTTGCCGCCGAACCTCTCGAGACGCAGCGCGGCGAGATTCGCACCTTCCGGC
TCGTCGACGGTTCGCGCGCGACGCTCGACACCGACAGCCGGCTCGACGTGGCCTTTTCGCATGGCGAACGAAGCGTTCGT
CTCGTGAGGGGCCGGGTTAGACTGTCGGTCGCGCCGGGCGATGTGCCACTCCGGATCGAGGCCGGGCGCGGCGAAGCGAC
GGCAAACGATGCGGAAATCGATCTGCGTCTCGCCGCATCGGGGAGAGTGGTCGCATCGCTGCGCCGCGGCGCAGCAGAGG
TACGCGCGGATGCAGACGTCGATCAGACCATGCCCCTCAAGGCGGGAAGCGCTCTCGCCTATGGACCCGGCAACCGGTTG
GAACCTGTCGCGGCGCCGGCGGCCGTCATTCAGCCAGACTGGACCGAAGGTTGGGCAGATTATCGATCGATCAAACTCGG
CGCGCTCGTCGCGGAAGCCAATCGCTACGCTGCGGTGCCGATCGTGATCGACGAAAGCGCAACAGCCGCCCGCGAAGTGT
CGGGCCGCTTCCACATCAGCCAGACCGACGCTTTCGCCGAGCGGATCGCCATATTGTTCGGTCTCGCCGTCGAACGGAGG
TCTGACGCCATCCACCTCCGCCGCCGATAA

Upstream 100 bases:

>100_bases
ATCGCGAGATACATGAACAGCTCGGCATCAGCATTGCGACGGTGGAATATCATATGATGAAGGCGCTCGGTCGGATCGCG
AAGGTGGTGGACAGCGAGAA

Downstream 100 bases:

>100_bases
ATTTTTTACCGAGCGACTAAGGTCGCTCCTATCTTCCCGTCATCGCACCCCCACTGGCCGTCTGCCTGATGCACGGCCGA
GAATATTGGGGGAGTGAAAA

Product: putative FecR

Products: NA

Alternate protein names: Anti-FecI Sigma Factor FecR; FecR Family Protein

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTKAGDDDYPVDEVARAWLVKMRGEDAEVLRGEFDAWLQASAEHREAYRHAEKRMAALAILKTSQRHGTTHAEARRGPMR
GWFTWGAVATAFALLIIAIGAAGAPFPGQPGGGATAFAAEPLETQRGEIRTFRLVDGSRATLDTDSRLDVAFSHGERSVR
LVRGRVRLSVAPGDVPLRIEAGRGEATANDAEIDLRLAASGRVVASLRRGAAEVRADADVDQTMPLKAGSALAYGPGNRL
EPVAAPAAVIQPDWTEGWADYRSIKLGALVAEANRYAAVPIVIDESATAAREVSGRFHISQTDAFAERIAILFGLAVERR
SDAIHLRRR

Sequences:

>Translated_329_residues
MTKAGDDDYPVDEVARAWLVKMRGEDAEVLRGEFDAWLQASAEHREAYRHAEKRMAALAILKTSQRHGTTHAEARRGPMR
GWFTWGAVATAFALLIIAIGAAGAPFPGQPGGGATAFAAEPLETQRGEIRTFRLVDGSRATLDTDSRLDVAFSHGERSVR
LVRGRVRLSVAPGDVPLRIEAGRGEATANDAEIDLRLAASGRVVASLRRGAAEVRADADVDQTMPLKAGSALAYGPGNRL
EPVAAPAAVIQPDWTEGWADYRSIKLGALVAEANRYAAVPIVIDESATAAREVSGRFHISQTDAFAERIAILFGLAVERR
SDAIHLRRR
>Mature_328_residues
TKAGDDDYPVDEVARAWLVKMRGEDAEVLRGEFDAWLQASAEHREAYRHAEKRMAALAILKTSQRHGTTHAEARRGPMRG
WFTWGAVATAFALLIIAIGAAGAPFPGQPGGGATAFAAEPLETQRGEIRTFRLVDGSRATLDTDSRLDVAFSHGERSVRL
VRGRVRLSVAPGDVPLRIEAGRGEATANDAEIDLRLAASGRVVASLRRGAAEVRADADVDQTMPLKAGSALAYGPGNRLE
PVAAPAAVIQPDWTEGWADYRSIKLGALVAEANRYAAVPIVIDESATAAREVSGRFHISQTDAFAERIAILFGLAVERRS
DAIHLRRR

Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]

COG id: COG3712

COG function: function code PT; Fe2+-dicitrate sensor, membrane component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35449; Mature: 35318

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAGDDDYPVDEVARAWLVKMRGEDAEVLRGEFDAWLQASAEHREAYRHAEKRMAALAI
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LKTSQRHGTTHAEARRGPMRGWFTWGAVATAFALLIIAIGAAGAPFPGQPGGGATAFAAE
HHHHCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC
PLETQRGEIRTFRLVDGSRATLDTDSRLDVAFSHGERSVRLVRGRVRLSVAPGDVPLRIE
CCCCCCCCEEEEEEECCCCCEECCCCCEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEE
AGRGEATANDAEIDLRLAASGRVVASLRRGAAEVRADADVDQTMPLKAGSALAYGPGNRL
CCCCCCCCCCCEEEEEEECCCHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEEECCCCCC
EPVAAPAAVIQPDWTEGWADYRSIKLGALVAEANRYAAVPIVIDESATAAREVSGRFHIS
CCCCCCCEEECCCCCCCHHHHHHEEHHEEEECCCCEEEEEEEECCCCHHHHHCCCCEEEE
QTDAFAERIAILFGLAVERRSDAIHLRRR
HHHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure 
TKAGDDDYPVDEVARAWLVKMRGEDAEVLRGEFDAWLQASAEHREAYRHAEKRMAALAI
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LKTSQRHGTTHAEARRGPMRGWFTWGAVATAFALLIIAIGAAGAPFPGQPGGGATAFAAE
HHHHCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC
PLETQRGEIRTFRLVDGSRATLDTDSRLDVAFSHGERSVRLVRGRVRLSVAPGDVPLRIE
CCCCCCCCEEEEEEECCCCCEECCCCCEEEEECCCCCEEEEEEEEEEEEECCCCEEEEEE
AGRGEATANDAEIDLRLAASGRVVASLRRGAAEVRADADVDQTMPLKAGSALAYGPGNRL
CCCCCCCCCCCEEEEEEECCCHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEEECCCCCC
EPVAAPAAVIQPDWTEGWADYRSIKLGALVAEANRYAAVPIVIDESATAAREVSGRFHIS
CCCCCCCEEECCCCCCCHHHHHHEEHHEEEECCCCEEEEEEEECCCCHHHHHCCCCEEEE
QTDAFAERIAILFGLAVERRSDAIHLRRR
HHHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA