| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487992
Identifier: 103487992
GI number: 103487992
Start: 2648883
End: 2649299
Strand: Direct
Name: 103487992
Synonym: Sala_2513
Alternate gene names: NA
Gene position: 2648883-2649299 (Clockwise)
Preceding gene: 103487991
Following gene: 103488001
Centisome position: 79.19
GC content: 64.51
Gene sequence:
>417_bases ATGAGTAGCCCGCGCGGTTCCGATCCCGCCAGCGGCGCCGGGGATTGGTCGGGTAACTGGCGCACGCTTGTCGGGCTCTG GGCTATTCCCGGCCTAGCCATGCTGGCCGCCATGTGGCTGGAACCTACGCCCCGCGCGGTCATCTGGACCGTCATGCTGG CCTCCATGGGTGCGGCTTGTATCATGAACGCCAGACGGTGCGGCCGGACTCATTGCCGTTTCACCGGACCGTTCCTGATT GGGATGGCGATACTGGTCGTCGCCTACGCGATTGGGATGCTGCCGCTGGGGCCACATGGCTGGGGTATTCTGGGCGGAGT CACGCTTGGCGGGTTTGCCGCTCTGTGGTGGGGCAGCGAACGGGCATGGGGCAAGTTCTCGCGTTCCAAAGATAAGGGCG TTTCTCGCAGCTGTTAG
Upstream 100 bases:
>100_bases AGGACTGAAGCTGGCTGCGCAGACATTCGATCGGGATGTGAAAAGGCTGTCCTGCTGTGCAGGATAAGATTGCTCGGTCG CGTCGCGGCGGTGAGATGAC
Downstream 100 bases:
>100_bases GTTTCGTGGGAGATCGGACGTCCGGCCACTGCTATAATGGCCCATTTGCGAACGACTGGTTTTGGGCCACGCGTCGCTGG CGGTGAATGGCCGGGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSSPRGSDPASGAGDWSGNWRTLVGLWAIPGLAMLAAMWLEPTPRAVIWTVMLASMGAACIMNARRCGRTHCRFTGPFLI GMAILVVAYAIGMLPLGPHGWGILGGVTLGGFAALWWGSERAWGKFSRSKDKGVSRSC
Sequences:
>Translated_138_residues MSSPRGSDPASGAGDWSGNWRTLVGLWAIPGLAMLAAMWLEPTPRAVIWTVMLASMGAACIMNARRCGRTHCRFTGPFLI GMAILVVAYAIGMLPLGPHGWGILGGVTLGGFAALWWGSERAWGKFSRSKDKGVSRSC >Mature_137_residues SSPRGSDPASGAGDWSGNWRTLVGLWAIPGLAMLAAMWLEPTPRAVIWTVMLASMGAACIMNARRCGRTHCRFTGPFLIG MAILVVAYAIGMLPLGPHGWGILGGVTLGGFAALWWGSERAWGKFSRSKDKGVSRSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14665; Mature: 14534
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPRGSDPASGAGDWSGNWRTLVGLWAIPGLAMLAAMWLEPTPRAVIWTVMLASMGAAC CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IMNARRCGRTHCRFTGPFLIGMAILVVAYAIGMLPLGPHGWGILGGVTLGGFAALWWGSE HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC RAWGKFSRSKDKGVSRSC CCHHCCCCCCCCCCCCCC >Mature Secondary Structure SSPRGSDPASGAGDWSGNWRTLVGLWAIPGLAMLAAMWLEPTPRAVIWTVMLASMGAAC CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IMNARRCGRTHCRFTGPFLIGMAILVVAYAIGMLPLGPHGWGILGGVTLGGFAALWWGSE HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC RAWGKFSRSKDKGVSRSC CCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA