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The map label for this gene is ykfG [C]

Identifier: 103487967

GI number: 103487967

Start: 2626482

End: 2627546

Strand: Direct

Name: ykfG [C]

Synonym: Sala_2488

Alternate gene names: 103487967

Gene position: 2626482-2627546 (Clockwise)

Preceding gene: 103487966

Following gene: 103487987

Centisome position: 78.52

GC content: 65.54

Gene sequence:

>1065_bases
GTGGCCGGTCCCGGCGATTCTCATCCTCGCAACCTGGCGTCACCAGCGTCGGCTGGCGCGCGGCGACAGCGAGCCGTCCT
GGCAAATCTCGTCGCCGCCATCGAACCCGACAATAGCGCGGCGATAGCTGAGGCTCTGCTGGCGGAACATCGCACGCTCG
CGCGCATCCTCGTGCAGTCCCCGGAGACGCTGGCGAGAACGCTTGGCAAAGACAGCGCGGTCAGCGCATTGCTTTGCGCA
ACGCAGGCGGCCGCGATCCAATCGTTGCGGGCCGACCTCGACGACCGCGGCATCGATCCCGCCAATCCGAAACTGCTTCG
CTATCTCAAATTGTCGATGGGCGCTTTGCCGCATGAAACGCTCAGGGTGCTGTTTCTCGACCCGGCGCGCCGCCTGATCG
CCGACGAACAATTGCAGCAGGGCACCATCGGCCATGTCGCAATCTATCCCCGCACGATATTCCGGCGCGCAGTTGAACTC
GATGCCGCCGCGATTATTCTTGTCCACAATCATCCGAGCGGCGATCCGACACCGAGCGAGGCCGACGTGGCGACAACAGC
GCGGCTGGCGGCCATAGGCCGGGCGCTCGAAATCCAGTTGCTCGAACATATCGTCGTCGCGCTGCGCGGCCACCGGGCCA
TCCTCAAACAAGGGACCGCGCTTCTCTACTCCCCTGCGCCCGACCATTTTCTATGCGACAGATCCGGCAACTGGCACAGC
GCGCCCGATGCCCCGCGCGCGCTGGCGAACGCACAGCGCGCCGCCCGACGGCGGCTGCTCCGTCGGCAGCTCGTCGGCAC
GCCCAGCCTCTTCGGCGAACCGGCCTGGGACATGCTCGTCGAGCTGTTCATCCATGAGGCCGAGGCCAAACCCGTTTCCA
CCAGTTCACTCTGCATTTCGTCGGGCCTTCCGATGAGCAGCGCGCTCCGGCTCCTGCAGCGCCTGACCGACGCCGGCCTT
GTCACGCGCGAGGCCGACCGGACCGATGGGCGGCGCAATTTCATTCTGCTCGACCCCGATCTCGGGCACCGCCTCATGGC
ATATTTTGCGGAAGGCGATGAATGA

Upstream 100 bases:

>100_bases
TCGCCGTTTTGCACATTGCCCCGTTGCTGGCGCACACCAGCCGGATGATCGACGTGGGCCTTCATCCCGCGGCCTATCTC
ACGATGCAGGTGGCGACGTC

Downstream 100 bases:

>100_bases
CCACCACCGAACGGAAAGAATGGTTGATTTCGGCGGCTCCCGTTCGGCAACTCTTCGTCAAAGAACCGCGAGCTTTGGCA
AGAGCTAAAGCCCCATGCCG

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAGPGDSHPRNLASPASAGARRQRAVLANLVAAIEPDNSAAIAEALLAEHRTLARILVQSPETLARTLGKDSAVSALLCA
TQAAAIQSLRADLDDRGIDPANPKLLRYLKLSMGALPHETLRVLFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVEL
DAAAIILVHNHPSGDPTPSEADVATTARLAAIGRALEIQLLEHIVVALRGHRAILKQGTALLYSPAPDHFLCDRSGNWHS
APDAPRALANAQRAARRRLLRRQLVGTPSLFGEPAWDMLVELFIHEAEAKPVSTSSLCISSGLPMSSALRLLQRLTDAGL
VTREADRTDGRRNFILLDPDLGHRLMAYFAEGDE

Sequences:

>Translated_354_residues
MAGPGDSHPRNLASPASAGARRQRAVLANLVAAIEPDNSAAIAEALLAEHRTLARILVQSPETLARTLGKDSAVSALLCA
TQAAAIQSLRADLDDRGIDPANPKLLRYLKLSMGALPHETLRVLFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVEL
DAAAIILVHNHPSGDPTPSEADVATTARLAAIGRALEIQLLEHIVVALRGHRAILKQGTALLYSPAPDHFLCDRSGNWHS
APDAPRALANAQRAARRRLLRRQLVGTPSLFGEPAWDMLVELFIHEAEAKPVSTSSLCISSGLPMSSALRLLQRLTDAGL
VTREADRTDGRRNFILLDPDLGHRLMAYFAEGDE
>Mature_353_residues
AGPGDSHPRNLASPASAGARRQRAVLANLVAAIEPDNSAAIAEALLAEHRTLARILVQSPETLARTLGKDSAVSALLCAT
QAAAIQSLRADLDDRGIDPANPKLLRYLKLSMGALPHETLRVLFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVELD
AAAIILVHNHPSGDPTPSEADVATTARLAAIGRALEIQLLEHIVVALRGHRAILKQGTALLYSPAPDHFLCDRSGNWHSA
PDAPRALANAQRAARRRLLRRQLVGTPSLFGEPAWDMLVELFIHEAEAKPVSTSSLCISSGLPMSSALRLLQRLTDAGLV
TREADRTDGRRNFILLDPDLGHRLMAYFAEGDE

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=135, Percent_Identity=38.5185185185185, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788997, Length=111, Percent_Identity=39.6396396396396, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788312, Length=124, Percent_Identity=37.9032258064516, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87082300, Length=107, Percent_Identity=37.3831775700935, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 38240; Mature: 38109

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPGDSHPRNLASPASAGARRQRAVLANLVAAIEPDNSAAIAEALLAEHRTLARILVQS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PETLARTLGKDSAVSALLCATQAAAIQSLRADLDDRGIDPANPKLLRYLKLSMGALPHET
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCCHHH
LRVLFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVELDAAAIILVHNHPSGDPTPSE
HEEEEECHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
ADVATTARLAAIGRALEIQLLEHIVVALRGHRAILKQGTALLYSPAPDHFLCDRSGNWHS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCEEECCCCCCCC
APDAPRALANAQRAARRRLLRRQLVGTPSLFGEPAWDMLVELFIHEAEAKPVSTSSLCIS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
SGLPMSSALRLLQRLTDAGLVTREADRTDGRRNFILLDPDLGHRLMAYFAEGDE
CCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AGPGDSHPRNLASPASAGARRQRAVLANLVAAIEPDNSAAIAEALLAEHRTLARILVQS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PETLARTLGKDSAVSALLCATQAAAIQSLRADLDDRGIDPANPKLLRYLKLSMGALPHET
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCCHHH
LRVLFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVELDAAAIILVHNHPSGDPTPSE
HEEEEECHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
ADVATTARLAAIGRALEIQLLEHIVVALRGHRAILKQGTALLYSPAPDHFLCDRSGNWHS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCEEECCCCCCCC
APDAPRALANAQRAARRRLLRRQLVGTPSLFGEPAWDMLVELFIHEAEAKPVSTSSLCIS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
SGLPMSSALRLLQRLTDAGLVTREADRTDGRRNFILLDPDLGHRLMAYFAEGDE
CCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA