| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487966
Identifier: 103487966
GI number: 103487966
Start: 2625761
End: 2626093
Strand: Direct
Name: 103487966
Synonym: Sala_2487
Alternate gene names: NA
Gene position: 2625761-2626093 (Clockwise)
Preceding gene: 103487965
Following gene: 103487967
Centisome position: 78.49
GC content: 63.06
Gene sequence:
>333_bases ATGTCCAACGAAATCACCATCACGGCCGCACGTCTCATCCGCGATGTCCCTGCGGCCGAAGTGCGCATCGACGATGCGCT CATCGCCTTATCCTCGTTGATGACAAGTGTCGTCACCGCCCGGCGCGATACGGTCGGAGTGCCCGCGGTCAAAGGACAGG CCGCGATCCGGAGATTGATGAAGGCGCAGGTCGCGCTGGTCGGCGTCAGCGGAGAAATCTTGCGTATCCATGGTGAACTC GCCGACATCGGCCGGGAGACCGCGGGCTATGACCTTCACGAATGTCCGTCGATCGCCGGGACGGTAACCGGCGTCCAAGC CGGTTCGGCCTGA
Upstream 100 bases:
>100_bases TGACGATCGGTGAAACACTGACGCGCCTCCTTTCCGGGTGACCCTTTCGCACAGTCGATCAGCAATGGCCGGAGCACTGG CTTCCGGCAGAGGAGAAGTC
Downstream 100 bases:
>100_bases CGCCGATTGACGGGCAGGCACCGCCATGAAAGTCTTGGTTCATGCGCATCGCATTGTTCCTTGGATTTCTGGCGGTTGCC ATATGCTATGCCGCCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSNEITITAARLIRDVPAAEVRIDDALIALSSLMTSVVTARRDTVGVPAVKGQAAIRRLMKAQVALVGVSGEILRIHGEL ADIGRETAGYDLHECPSIAGTVTGVQAGSA
Sequences:
>Translated_110_residues MSNEITITAARLIRDVPAAEVRIDDALIALSSLMTSVVTARRDTVGVPAVKGQAAIRRLMKAQVALVGVSGEILRIHGEL ADIGRETAGYDLHECPSIAGTVTGVQAGSA >Mature_109_residues SNEITITAARLIRDVPAAEVRIDDALIALSSLMTSVVTARRDTVGVPAVKGQAAIRRLMKAQVALVGVSGEILRIHGELA DIGRETAGYDLHECPSIAGTVTGVQAGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11406; Mature: 11275
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEITITAARLIRDVPAAEVRIDDALIALSSLMTSVVTARRDTVGVPAVKGQAAIRRLM CCCCEEEHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KAQVALVGVSGEILRIHGELADIGRETAGYDLHECPSIAGTVTGVQAGSA HHHHHEECCCCCEEEEECHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SNEITITAARLIRDVPAAEVRIDDALIALSSLMTSVVTARRDTVGVPAVKGQAAIRRLM CCCEEEHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KAQVALVGVSGEILRIHGELADIGRETAGYDLHECPSIAGTVTGVQAGSA HHHHHEECCCCCEEEEECHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA