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The map label for this gene is yagA [H]

Identifier: 103487930

GI number: 103487930

Start: 2590864

End: 2591844

Strand: Direct

Name: yagA [H]

Synonym: Sala_2451

Alternate gene names: 103487930

Gene position: 2590864-2591844 (Clockwise)

Preceding gene: 103487929

Following gene: 103487932

Centisome position: 77.45

GC content: 61.57

Gene sequence:

>981_bases
ATGAGATATCCCGCATCCGAGAAGCTCGAGATCATCAGAACCGTCGAGCAGTCGCACCTGTCGGCCAAGCGCACGCTGGA
CCAACTCGGCATCCCTCGTCGGACATTCTACCGCTGGTATGATCGCTACCTCGAAGGCGGGCCGGAGGCGTTGGAAGATC
GGCCATCGGCGCCGAGCCGGGTGTGGAACCGCATCCCGGCGGGCATCCACGACCAGATCATCGAGCTGGCGCTGGAACAG
TCTGAGCTGAGCCCCCGGGAACTGGCCGTGCGCTTCACCGAAGGGCAGCGCTACTTCGTGTCGGAATCCACGGTTTACCG
CCTGTTGAAGGCCCACGACCTGATCACCAGCCCGGCCTATGTCGTGATCAAGGCTGCCGATCAGTTCCACACGAAAACCA
CGCGGCCGAACGAGATGTGGCAGACCGACTTCACCTACTTCAAGATCATCGGGTGGGGCTGGATGTATCTGTCGACCGTG
CTCGACGACTTCTCACGCTACATCATCGCCTGGAAGCTGTGCACCAACATGCGAGCCGAGGACGTCACCGACACGCTGGA
CCTCGCCCTGGCGGCTTCTGGTTGCGACAGCGCCACGGTGCTGCACAAACCCCGGATACTCAGCGATAATGGCCCCAGCT
ACATCGCGGGTGAGCTGGCGGAATACATCGAGGCCCGGAAGATGAGCCATGTCCGCGGCGCCCCGTGTCATCCCCAAACC
CAGGGCAAGATCGAGCGCTGGCACCAGACCCTGAAAAACCGCATCTTGCTGGAAAACTACTTCCTGCCCGGCGACCTCGA
AGCCCACATCGAGACCTTCGTCGAGCACTACAATCGCCAGCGATACCACGAGAGCCTGGCCAACGTGACGCCTGCCGACG
CCTACTTCGGCAGGGCTCCGGCAATCATCAAACTGCGCGAAAGGATCAAGCGACAGACCATCGAACATCGGCGCTTGCAG
CACCGCAAGTTCGCCGCCTAA

Upstream 100 bases:

>100_bases
TGCGCCGCGAAGCCCGGGCCCTGAAGGAATGCGTGGCCGATCTGACACTGGAAAACCGTCTGCTCAAAAAAAGCATGGTC
GCGGATGGGGGCAACGACGA

Downstream 100 bases:

>100_bases
CATCAACCCCCTGACGAGGTCCGCACTCCGCTAATCTACGCCGCGAGTTGTGCCGAATGTTCTGACGACGGACACCTATT
TAACCGACGGCCTTCCCTGA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRYPASEKLEIIRTVEQSHLSAKRTLDQLGIPRRTFYRWYDRYLEGGPEALEDRPSAPSRVWNRIPAGIHDQIIELALEQ
SELSPRELAVRFTEGQRYFVSESTVYRLLKAHDLITSPAYVVIKAADQFHTKTTRPNEMWQTDFTYFKIIGWGWMYLSTV
LDDFSRYIIAWKLCTNMRAEDVTDTLDLALAASGCDSATVLHKPRILSDNGPSYIAGELAEYIEARKMSHVRGAPCHPQT
QGKIERWHQTLKNRILLENYFLPGDLEAHIETFVEHYNRQRYHESLANVTPADAYFGRAPAIIKLRERIKRQTIEHRRLQ
HRKFAA

Sequences:

>Translated_326_residues
MRYPASEKLEIIRTVEQSHLSAKRTLDQLGIPRRTFYRWYDRYLEGGPEALEDRPSAPSRVWNRIPAGIHDQIIELALEQ
SELSPRELAVRFTEGQRYFVSESTVYRLLKAHDLITSPAYVVIKAADQFHTKTTRPNEMWQTDFTYFKIIGWGWMYLSTV
LDDFSRYIIAWKLCTNMRAEDVTDTLDLALAASGCDSATVLHKPRILSDNGPSYIAGELAEYIEARKMSHVRGAPCHPQT
QGKIERWHQTLKNRILLENYFLPGDLEAHIETFVEHYNRQRYHESLANVTPADAYFGRAPAIIKLRERIKRQTIEHRRLQ
HRKFAA
>Mature_326_residues
MRYPASEKLEIIRTVEQSHLSAKRTLDQLGIPRRTFYRWYDRYLEGGPEALEDRPSAPSRVWNRIPAGIHDQIIELALEQ
SELSPRELAVRFTEGQRYFVSESTVYRLLKAHDLITSPAYVVIKAADQFHTKTTRPNEMWQTDFTYFKIIGWGWMYLSTV
LDDFSRYIIAWKLCTNMRAEDVTDTLDLALAASGCDSATVLHKPRILSDNGPSYIAGELAEYIEARKMSHVRGAPCHPQT
QGKIERWHQTLKNRILLENYFLPGDLEAHIETFVEHYNRQRYHESLANVTPADAYFGRAPAIIKLRERIKRQTIEHRRLQ
HRKFAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=292, Percent_Identity=29.1095890410959, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 37975; Mature: 37975

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPASEKLEIIRTVEQSHLSAKRTLDQLGIPRRTFYRWYDRYLEGGPEALEDRPSAPSR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHH
VWNRIPAGIHDQIIELALEQSELSPRELAVRFTEGQRYFVSESTVYRLLKAHDLITSPAY
HHHHCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCE
VVIKAADQFHTKTTRPNEMWQTDFTYFKIIGWGWMYLSTVLDDFSRYIIAWKLCTNMRAE
EEEEECHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DVTDTLDLALAASGCDSATVLHKPRILSDNGPSYIAGELAEYIEARKMSHVRGAPCHPQT
HHHHHHHHHHHHCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGKIERWHQTLKNRILLENYFLPGDLEAHIETFVEHYNRQRYHESLANVTPADAYFGRAP
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
AIIKLRERIKRQTIEHRRLQHRKFAA
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRYPASEKLEIIRTVEQSHLSAKRTLDQLGIPRRTFYRWYDRYLEGGPEALEDRPSAPSR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHH
VWNRIPAGIHDQIIELALEQSELSPRELAVRFTEGQRYFVSESTVYRLLKAHDLITSPAY
HHHHCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCE
VVIKAADQFHTKTTRPNEMWQTDFTYFKIIGWGWMYLSTVLDDFSRYIIAWKLCTNMRAE
EEEEECHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DVTDTLDLALAASGCDSATVLHKPRILSDNGPSYIAGELAEYIEARKMSHVRGAPCHPQT
HHHHHHHHHHHHCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGKIERWHQTLKNRILLENYFLPGDLEAHIETFVEHYNRQRYHESLANVTPADAYFGRAP
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
AIIKLRERIKRQTIEHRRLQHRKFAA
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8113168 [H]