Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487929

Identifier: 103487929

GI number: 103487929

Start: 2590694

End: 2590867

Strand: Direct

Name: 103487929

Synonym: Sala_2450

Alternate gene names: NA

Gene position: 2590694-2590867 (Clockwise)

Preceding gene: 103487928

Following gene: 103487930

Centisome position: 77.45

GC content: 65.52

Gene sequence:

>174_bases
ATGGAAGCTGGCAAGCGCCGCCTGGCCGGCGACACCGCCCGTGCCGCGACCACCGGAGAGGTCCAGGACCTGCGCCGCGA
AGCCCGGGCCCTGAAGGAATGCGTGGCCGATCTGACACTGGAAAACCGTCTGCTCAAAAAAAGCATGGTCGCGGATGGGG
GCAACGACGAATGA

Upstream 100 bases:

>100_bases
AAAACTGGAGCGGGCGAAGGGATTCGAACCCTCGATCGCCGAGCTATGCCGCAAGGAAGGCATTGCCCAGAGCCTGTATT
ACACCTGGTCGAAGGAGTTC

Downstream 100 bases:

>100_bases
GATATCCCGCATCCGAGAAGCTCGAGATCATCAGAACCGTCGAGCAGTCGCACCTGTCGGCCAAGCGCACGCTGGACCAA
CTCGGCATCCCTCGTCGGAC

Product: transposase IS3/IS911

Products: NA

Alternate protein names: Transposase IS3/IS; Transposase; Transposase Subfamily; Transposase IS3 Family Protein; Transposase OrfA

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MEAGKRRLAGDTARAATTGEVQDLRREARALKECVADLTLENRLLKKSMVADGGNDE

Sequences:

>Translated_57_residues
MEAGKRRLAGDTARAATTGEVQDLRREARALKECVADLTLENRLLKKSMVADGGNDE
>Mature_57_residues
MEAGKRRLAGDTARAATTGEVQDLRREARALKECVADLTLENRLLKKSMVADGGNDE

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6202; Mature: 6202

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAGKRRLAGDTARAATTGEVQDLRREARALKECVADLTLENRLLKKSMVADGGNDE
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEAGKRRLAGDTARAATTGEVQDLRREARALKECVADLTLENRLLKKSMVADGGNDE
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA