Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is cusB [H]

Identifier: 103487875

GI number: 103487875

Start: 2529876

End: 2531108

Strand: Reverse

Name: cusB [H]

Synonym: Sala_2394

Alternate gene names: 103487875

Gene position: 2531108-2529876 (Counterclockwise)

Preceding gene: 103487876

Following gene: 103487874

Centisome position: 75.66

GC content: 66.42

Gene sequence:

>1233_bases
ATGAGCGATGTTTCAACCGCGGCGCGCTGGCGCGCCGGAATAATGGCCGCCGTCTTGATCGCGGGCGGCGGAGGATATTG
GCTGGGCCAGCGTGATAGCGATGTCCCATCGAGCGCGGCGAGCGATGAGGGGCGCAAAATCCTTTATTATTATGACCCGA
TGTTTCCGAACCAGAAGTTCGAAAAACCCGGCAAATCGCCGTTCATGGATATGGAGCTTGTACCCAAATATGCCGACGAA
GGCGGCGCGAACGGCGCTCCTTCAGGCATTTCGGTCGATCCGTCGGCGATGCAGAATCTGGGAATGCGCGTCGTCGCCGC
CGAAACGGGCAGCCTCGCGGCGAGTTTCGACGTCACCGGCACGATCGACTTCAACGAACGCGACGTTGCAATCGTGCAGG
CCCGCTCGGGCGGCTTCGTCGAGCGCGTCTATCGGCTGGCCCCGGGCGATGTCATTCGTGCCGGGACGCCGATCGCCGAT
GTGCAATCGCCCGAATGGGGCGGCGCACAGACCGAATATCTGAGCGTCAAGCGGCTCGGCAAGCCCGAACTGACGGCGGC
GGCGCGCCAGCGGCTGCGGCTGATGGGCATGGCCGACACGGTCATCGCCCAGGTCGATCGCACGGGGCGGACGAGCGGCA
CGGTGACGATCCGGTCGCCGATCGGCGGCGTGGTCCGGTCGCTCGACGCGCGCGCCGGAGTGACGCTGGCGCAGGGGCAA
ACGCTTGCGGAGGTCTCGGGACTGGGCAGCGTCTGGCTCCACGCCGCCTTGCCCGAGGCGCAAGCCGCGTCGGTGCGGGT
CGGGCAACGCGCGGTCGCGACGCTCACCGCCTTTCCCGGTGAGACGTTCGGCGGGCGTGTCATCGCGATCCTGCCAACAA
TACAAAGCGACAGCCGGACGCTCACCGTCCGCATCGAGCTTCCCAATCGTGGCGGCCGGTTGCGCCCCGGCATGTTCGCC
AATGTCACGCTGGGTGGCGACGCCGAACCGGCGCTGTTGGTGCCGAGCGAGGCGGTCATCCGCACCGGCACCCGCAGCAT
CGTCATGCTCGCCACGGGCGATGGGCGCTATCATCCGGCCGAAGTGCAAACCGGGCGCGAGGGCGATGGCAAGACCGAAA
TCTTGCGCGGGCTGACGGTTGGCGAAAAAATCGTCGCCTCGGGTCAGTTCCTGCTCGATTCCGAAGCAAGCCTGACCGGC
ATCGCCGTCCGCCCGCTTGGTGACGCGAAATGA

Upstream 100 bases:

>100_bases
CGCTCGCGCTGGTCGAGGCCGAAGTCGATGCGCTCGCGCGCGAAGCCGACGTTGCCCGCGACGCGATTCGCATTCAATTT
ACCTATGGGGACACACAGCC

Downstream 100 bases:

>100_bases
TCAAGCGGATCATTCGCGCCTCGGTCGCCGCGCGCGGGCTGGTCGTCGCCGCGGCGCTGATCCTGACGCTTGTCGGGATC
GCCGCGGTGCGGACGACGCC

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSDVSTAARWRAGIMAAVLIAGGGGYWLGQRDSDVPSSAASDEGRKILYYYDPMFPNQKFEKPGKSPFMDMELVPKYADE
GGANGAPSGISVDPSAMQNLGMRVVAAETGSLAASFDVTGTIDFNERDVAIVQARSGGFVERVYRLAPGDVIRAGTPIAD
VQSPEWGGAQTEYLSVKRLGKPELTAAARQRLRLMGMADTVIAQVDRTGRTSGTVTIRSPIGGVVRSLDARAGVTLAQGQ
TLAEVSGLGSVWLHAALPEAQAASVRVGQRAVATLTAFPGETFGGRVIAILPTIQSDSRTLTVRIELPNRGGRLRPGMFA
NVTLGGDAEPALLVPSEAVIRTGTRSIVMLATGDGRYHPAEVQTGREGDGKTEILRGLTVGEKIVASGQFLLDSEASLTG
IAVRPLGDAK

Sequences:

>Translated_410_residues
MSDVSTAARWRAGIMAAVLIAGGGGYWLGQRDSDVPSSAASDEGRKILYYYDPMFPNQKFEKPGKSPFMDMELVPKYADE
GGANGAPSGISVDPSAMQNLGMRVVAAETGSLAASFDVTGTIDFNERDVAIVQARSGGFVERVYRLAPGDVIRAGTPIAD
VQSPEWGGAQTEYLSVKRLGKPELTAAARQRLRLMGMADTVIAQVDRTGRTSGTVTIRSPIGGVVRSLDARAGVTLAQGQ
TLAEVSGLGSVWLHAALPEAQAASVRVGQRAVATLTAFPGETFGGRVIAILPTIQSDSRTLTVRIELPNRGGRLRPGMFA
NVTLGGDAEPALLVPSEAVIRTGTRSIVMLATGDGRYHPAEVQTGREGDGKTEILRGLTVGEKIVASGQFLLDSEASLTG
IAVRPLGDAK
>Mature_409_residues
SDVSTAARWRAGIMAAVLIAGGGGYWLGQRDSDVPSSAASDEGRKILYYYDPMFPNQKFEKPGKSPFMDMELVPKYADEG
GANGAPSGISVDPSAMQNLGMRVVAAETGSLAASFDVTGTIDFNERDVAIVQARSGGFVERVYRLAPGDVIRAGTPIADV
QSPEWGGAQTEYLSVKRLGKPELTAAARQRLRLMGMADTVIAQVDRTGRTSGTVTIRSPIGGVVRSLDARAGVTLAQGQT
LAEVSGLGSVWLHAALPEAQAASVRVGQRAVATLTAFPGETFGGRVIAILPTIQSDSRTLTVRIELPNRGGRLRPGMFAN
VTLGGDAEPALLVPSEAVIRTGTRSIVMLATGDGRYHPAEVQTGREGDGKTEILRGLTVGEKIVASGQFLLDSEASLTGI
AVRPLGDAK

Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1786787, Length=389, Percent_Identity=39.3316195372751, Blast_Score=295, Evalue=3e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42979; Mature: 42848

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVSTAARWRAGIMAAVLIAGGGGYWLGQRDSDVPSSAASDEGRKILYYYDPMFPNQKF
CCCHHHHHHHHHHHEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH
EKPGKSPFMDMELVPKYADEGGANGAPSGISVDPSAMQNLGMRVVAAETGSLAASFDVTG
CCCCCCCCCCHHHCCCHHCCCCCCCCCCCCEECHHHHHHCCEEEEEECCCCEEEEEEEEE
TIDFNERDVAIVQARSGGFVERVYRLAPGDVIRAGTPIADVQSPEWGGAQTEYLSVKRLG
EEECCCCCEEEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEHHHCC
KPELTAAARQRLRLMGMADTVIAQVDRTGRTSGTVTIRSPIGGVVRSLDARAGVTLAQGQ
CCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCEEEECCC
TLAEVSGLGSVWLHAALPEAQAASVRVGQRAVATLTAFPGETFGGRVIAILPTIQSDSRT
CHHHHHCCCCEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEE
LTVRIELPNRGGRLRPGMFANVTLGGDAEPALLVPSEAVIRTGTRSIVMLATGDGRYHPA
EEEEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCHHHHCCCCCEEEEEEECCCCCCCC
EVQTGREGDGKTEILRGLTVGEKIVASGQFLLDSEASLTGIAVRPLGDAK
CCCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEECCCCEEEEEEECCCCCC
>Mature Secondary Structure 
SDVSTAARWRAGIMAAVLIAGGGGYWLGQRDSDVPSSAASDEGRKILYYYDPMFPNQKF
CCHHHHHHHHHHHEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH
EKPGKSPFMDMELVPKYADEGGANGAPSGISVDPSAMQNLGMRVVAAETGSLAASFDVTG
CCCCCCCCCCHHHCCCHHCCCCCCCCCCCCEECHHHHHHCCEEEEEECCCCEEEEEEEEE
TIDFNERDVAIVQARSGGFVERVYRLAPGDVIRAGTPIADVQSPEWGGAQTEYLSVKRLG
EEECCCCCEEEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEHHHCC
KPELTAAARQRLRLMGMADTVIAQVDRTGRTSGTVTIRSPIGGVVRSLDARAGVTLAQGQ
CCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCEEEECCC
TLAEVSGLGSVWLHAALPEAQAASVRVGQRAVATLTAFPGETFGGRVIAILPTIQSDSRT
CHHHHHCCCCEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEE
LTVRIELPNRGGRLRPGMFANVTLGGDAEPALLVPSEAVIRTGTRSIVMLATGDGRYHPA
EEEEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCHHHHCCCCCEEEEEEECCCCCCCC
EVQTGREGDGKTEILRGLTVGEKIVASGQFLLDSEASLTGIAVRPLGDAK
CCCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEECCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]