Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487853

Identifier: 103487853

GI number: 103487853

Start: 2495138

End: 2496097

Strand: Reverse

Name: 103487853

Synonym: Sala_2372

Alternate gene names: NA

Gene position: 2496097-2495138 (Counterclockwise)

Preceding gene: 103487854

Following gene: 103487850

Centisome position: 74.62

GC content: 65.94

Gene sequence:

>960_bases
ATGCAACAGATGAATCCGCCGCTTGTGCGGCCGGCAACGCGCCCGGTGCGTTCATGGGTGTTCGACAGCGCGGGATGGGA
CGGTTTCCCCCTGCGCCGCGACGACATCGTCATTTCGACCTATCCCAAATGCGGGACGACGTGGATGCAGCGTATCGTCG
GCATGTTGGTCTTTGGCAGCGCCGCACCCTTTCCGGTGCAGGACAGTTCGCCCTGGCCCGATTTCCGCCTGGTGCCGCTC
GAGGCCACGACCGCGCTCGCCGAGGGTCAGGCGCACCGCCGCTTCCTGAAATCGCACCTGCCGTTCGACGCCCTGCCGGT
GCATGAGGGGATCAAATATATCCATGTCGCGCGCGACGGCCGCGATGCCGCCATGTCCTTTTTCAATCACAAGGCGAATT
ACACCGCGGAGGCGGTCGAACTGATCGGCGGCATCGTCGAGAGCGATCCCAAATTCGGCCATGTGCCGCGCCTCGTGCCC
ACCGATCCGGCCGCGCATTTCCACGACTGGCTCGTCGGCGACGAGGACGCGCTGGGCGATCCCGGCGCGTCCTTCTTCAC
GATGGAAAAAAGTTTCTGGGAGGCGCGGCACGACCCCAACCTGCTGCTCGTCCACTATAACGACCTCAAGGCCGATCGCA
TGGGCGAGATGCGTCGTATCGCCGATTTTCTGGACATTGCGATCCCCGATGACCTCTGGCCCGATCTGGTCGCGGCGGCG
GGGTTCGACGCGATGAAGGCGGCCGCCGACGCGCTGCTTCCCGCTGCGGGCGATATCTGGGAAGGCGGCGGGCGAACCTT
CCTGCACAAGGGAACCAACGGGCGCTGGCGCGATCTGTACGCCGCTCCGGACCTTGCGCTCTATGACGCGCGCGTCGCCG
CCGAATTCACCCCCGGACTCGCCGCCTGGGTCGAAAAGGGCCGACTGGCCACCTCCGATCCCCGCGCCGCCCCCGACTGA

Upstream 100 bases:

>100_bases
TCGCGCGCCACTGGCGCCCGGCGATCGAGCGTGCCGCGACCGCCGAAATCGCGGGATAGCGGCGGCAAATTATGTTATTC
CCTGTGCGGGAGGGGCTATC

Downstream 100 bases:

>100_bases
CGCATCGGCAGCGGTGCGGCGCCTGCGCTATTCGATTGCGCGACCCGGCGACCAGGGCAGGGGTTCGAGCGTGCGGTCCG
ATATCGCATCGACGAAGCGG

Product: sulfotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MQQMNPPLVRPATRPVRSWVFDSAGWDGFPLRRDDIVISTYPKCGTTWMQRIVGMLVFGSAAPFPVQDSSPWPDFRLVPL
EATTALAEGQAHRRFLKSHLPFDALPVHEGIKYIHVARDGRDAAMSFFNHKANYTAEAVELIGGIVESDPKFGHVPRLVP
TDPAAHFHDWLVGDEDALGDPGASFFTMEKSFWEARHDPNLLLVHYNDLKADRMGEMRRIADFLDIAIPDDLWPDLVAAA
GFDAMKAAADALLPAAGDIWEGGGRTFLHKGTNGRWRDLYAAPDLALYDARVAAEFTPGLAAWVEKGRLATSDPRAAPD

Sequences:

>Translated_319_residues
MQQMNPPLVRPATRPVRSWVFDSAGWDGFPLRRDDIVISTYPKCGTTWMQRIVGMLVFGSAAPFPVQDSSPWPDFRLVPL
EATTALAEGQAHRRFLKSHLPFDALPVHEGIKYIHVARDGRDAAMSFFNHKANYTAEAVELIGGIVESDPKFGHVPRLVP
TDPAAHFHDWLVGDEDALGDPGASFFTMEKSFWEARHDPNLLLVHYNDLKADRMGEMRRIADFLDIAIPDDLWPDLVAAA
GFDAMKAAADALLPAAGDIWEGGGRTFLHKGTNGRWRDLYAAPDLALYDARVAAEFTPGLAAWVEKGRLATSDPRAAPD
>Mature_319_residues
MQQMNPPLVRPATRPVRSWVFDSAGWDGFPLRRDDIVISTYPKCGTTWMQRIVGMLVFGSAAPFPVQDSSPWPDFRLVPL
EATTALAEGQAHRRFLKSHLPFDALPVHEGIKYIHVARDGRDAAMSFFNHKANYTAEAVELIGGIVESDPKFGHVPRLVP
TDPAAHFHDWLVGDEDALGDPGASFFTMEKSFWEARHDPNLLLVHYNDLKADRMGEMRRIADFLDIAIPDDLWPDLVAAA
GFDAMKAAADALLPAAGDIWEGGGRTFLHKGTNGRWRDLYAAPDLALYDARVAAEFTPGLAAWVEKGRLATSDPRAAPD

Specific function: Involved in the synthesis of cell wall sulfolipids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfotransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI29550893, Length=301, Percent_Identity=23.2558139534884, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI4507303, Length=301, Percent_Identity=23.2558139534884, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI29540539, Length=302, Percent_Identity=22.8476821192053, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI29540537, Length=302, Percent_Identity=22.8476821192053, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI29540535, Length=302, Percent_Identity=22.8476821192053, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI29540531, Length=302, Percent_Identity=22.8476821192053, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI4885617, Length=264, Percent_Identity=25.3787878787879, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221468277, Length=297, Percent_Identity=25.9259259259259, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000863 [H]

Pfam domain/function: PF00685 Sulfotransfer_1 [H]

EC number: NA

Molecular weight: Translated: 35268; Mature: 35268

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQMNPPLVRPATRPVRSWVFDSAGWDGFPLRRDDIVISTYPKCGTTWMQRIVGMLVFGS
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC
AAPFPVQDSSPWPDFRLVPLEATTALAEGQAHRRFLKSHLPFDALPVHEGIKYIHVARDG
CCCCCCCCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHCCCCCCEEHHHCCEEEEEECCC
RDAAMSFFNHKANYTAEAVELIGGIVESDPKFGHVPRLVPTDPAAHFHDWLVGDEDALGD
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
PGASFFTMEKSFWEARHDPNLLLVHYNDLKADRMGEMRRIADFLDIAIPDDLWPDLVAAA
CCCCEEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
GFDAMKAAADALLPAAGDIWEGGGRTFLHKGTNGRWRDLYAAPDLALYDARVAAEFTPGL
CHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHCCCHH
AAWVEKGRLATSDPRAAPD
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQMNPPLVRPATRPVRSWVFDSAGWDGFPLRRDDIVISTYPKCGTTWMQRIVGMLVFGS
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC
AAPFPVQDSSPWPDFRLVPLEATTALAEGQAHRRFLKSHLPFDALPVHEGIKYIHVARDG
CCCCCCCCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHCCCCCCEEHHHCCEEEEEECCC
RDAAMSFFNHKANYTAEAVELIGGIVESDPKFGHVPRLVPTDPAAHFHDWLVGDEDALGD
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
PGASFFTMEKSFWEARHDPNLLLVHYNDLKADRMGEMRRIADFLDIAIPDDLWPDLVAAA
CCCCEEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
GFDAMKAAADALLPAAGDIWEGGGRTFLHKGTNGRWRDLYAAPDLALYDARVAAEFTPGL
CHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHCCCHH
AAWVEKGRLATSDPRAAPD
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA