Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487848

Identifier: 103487848

GI number: 103487848

Start: 2490869

End: 2491273

Strand: Reverse

Name: 103487848

Synonym: Sala_2367

Alternate gene names: NA

Gene position: 2491273-2490869 (Counterclockwise)

Preceding gene: 103487849

Following gene: 103487843

Centisome position: 74.47

GC content: 62.96

Gene sequence:

>405_bases
ATGCTCAAGACCCACCATGGTTCGTGCCACTGCGGCGCCGTCAAGTTCGAGGCCGACATCGACCTCGATGCGGGGACGGG
CAAGTGCAACTGCTCGATCTGCACCAAGAAACGGAACTGGAGCGCGCAGATCGAGCCGGGGGCGTTTCGCCTGCTGAGCG
ATCCGGCGGCGCTGTCCGACTATCAGTTCGGGTCGAACAGCGCGCATCATGTCTTTTGCAAGACGTGCGGCGTGTCGGCG
TTCGGGCACGGTTATGTCGAGGAAATCGGCGGTGCCTATGTTTCGGTTTCGATCGCGTGCCTCGACGATCTGACCCCCGC
CGACATGGCGGCGCTGCCCGTGACCCATATGGACGGCGCGGGCAATAATTGGTGGAACCCGCCAGAGGTCACGGCGCATC
TGTGA

Upstream 100 bases:

>100_bases
AAGGGGTGGGACGACGCTTCCTGACATGATCTGTCAGGGGGCTTCGTTACATCGCTTCGGGTGAAAGGCGCCTTCACGCG
CCGCCAACCGGAGGATGAAG

Downstream 100 bases:

>100_bases
GGGTGCCGATCATGGAGCCGCCGCAACCGGCCGCGCGGGCAGCGCGATCAGTAACCCAGCGTCGCTTCGAGGAACCAGAT
GCGCTGCTGCGTCTCGTCGG

Product: glutathione-dependent formaldehyde-activating, GFA

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLKTHHGSCHCGAVKFEADIDLDAGTGKCNCSICTKKRNWSAQIEPGAFRLLSDPAALSDYQFGSNSAHHVFCKTCGVSA
FGHGYVEEIGGAYVSVSIACLDDLTPADMAALPVTHMDGAGNNWWNPPEVTAHL

Sequences:

>Translated_134_residues
MLKTHHGSCHCGAVKFEADIDLDAGTGKCNCSICTKKRNWSAQIEPGAFRLLSDPAALSDYQFGSNSAHHVFCKTCGVSA
FGHGYVEEIGGAYVSVSIACLDDLTPADMAALPVTHMDGAGNNWWNPPEVTAHL
>Mature_134_residues
MLKTHHGSCHCGAVKFEADIDLDAGTGKCNCSICTKKRNWSAQIEPGAFRLLSDPAALSDYQFGSNSAHHVFCKTCGVSA
FGHGYVEEIGGAYVSVSIACLDDLTPADMAALPVTHMDGAGNNWWNPPEVTAHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56118234, Length=108, Percent_Identity=37.962962962963, Blast_Score=76, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI25149380, Length=79, Percent_Identity=41.7721518987342, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25149382, Length=79, Percent_Identity=41.7721518987342, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14239; Mature: 14239

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTHHGSCHCGAVKFEADIDLDAGTGKCNCSICTKKRNWSAQIEPGAFRLLSDPAALSD
CCCCCCCCEEEEEEEEEECEEEECCCCEEEEEEEECCCCCCEEECCCEEEEECCCCCCCC
YQFGSNSAHHVFCKTCGVSAFGHGYVEEIGGAYVSVSIACLDDLTPADMAALPVTHMDGA
CCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEEEEEECCCCCCCCEECCEEECCCC
GNNWWNPPEVTAHL
CCCCCCCCCEEECC
>Mature Secondary Structure
MLKTHHGSCHCGAVKFEADIDLDAGTGKCNCSICTKKRNWSAQIEPGAFRLLSDPAALSD
CCCCCCCCEEEEEEEEEECEEEECCCCEEEEEEEECCCCCCEEECCCEEEEECCCCCCCC
YQFGSNSAHHVFCKTCGVSAFGHGYVEEIGGAYVSVSIACLDDLTPADMAALPVTHMDGA
CCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEEEEEECCCCCCCCEECCEEECCCC
GNNWWNPPEVTAHL
CCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA