| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is purE [H]
Identifier: 103487843
GI number: 103487843
Start: 2487907
End: 2488416
Strand: Reverse
Name: purE [H]
Synonym: Sala_2362
Alternate gene names: 103487843
Gene position: 2488416-2487907 (Counterclockwise)
Preceding gene: 103487848
Following gene: 103487842
Centisome position: 74.39
GC content: 70.39
Gene sequence:
>510_bases ATGGGCGACAGCGCGCCGCAGGCCGAGGTGAGCGTGGGCGTCATCATGGGCAGCCAGTCGGACTGGCCGACGATGGCGCA TTCGGTTCAGATCCTTGAAGAATTCGGCATCGCGTGCGAGGTCCGGATCGTGTCCGCGCACCGCACCCCCGACCGCCTCG TCGCCTATGCCAAGGGCGCGGCGGACCGCGGGCTGAAGGCGATCATCGCGGGCGCGGGCGGCGCCGCGCACCTGCCGGGC ATGGTCGCAGCGATGACGCGCGTACCCGTGCTGGGGGTGCCCGTGCAGTCGGCGGCGCTGTCGGGCGTCGACAGCCTCTA TTCGATCGTCCAGATGCCCGGCGGCGTTCCCGTCGCCACCTTTGCGATCGGCAAGGCGGGGGCGACCAACGCGGGCCTTT TCGCTGTGGCGCTGCTCGCGAACGCAGACCCCGATCTGGCGCAAAAACTCGATGCGTGGCGGGCCAGACAGGCCGACAGC GTCGCACCTGCCCCTGTTCGTGAGGGCTGA
Upstream 100 bases:
>100_bases TTGCGAAACCGGCGGCGTTGCCCGCGCGCAACCTTGCCGCTAGGGGGAGGGCGGCGGCGATTCATCGACGGACCGGCCGC CCGCACAAGGAGGGATCGGG
Downstream 100 bases:
>100_bases GCGCTTGCTGTCTCCCGGTTCGACGATCGGCATCCTCGGCGGCGGCCAGCTCGGGCGGATGCTTGGCCAGGCGGCGGCGC AGCTTGGTTACCGCGTCCAC
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGDSAPQAEVSVGVIMGSQSDWPTMAHSVQILEEFGIACEVRIVSAHRTPDRLVAYAKGAADRGLKAIIAGAGGAAHLPG MVAAMTRVPVLGVPVQSAALSGVDSLYSIVQMPGGVPVATFAIGKAGATNAGLFAVALLANADPDLAQKLDAWRARQADS VAPAPVREG
Sequences:
>Translated_169_residues MGDSAPQAEVSVGVIMGSQSDWPTMAHSVQILEEFGIACEVRIVSAHRTPDRLVAYAKGAADRGLKAIIAGAGGAAHLPG MVAAMTRVPVLGVPVQSAALSGVDSLYSIVQMPGGVPVATFAIGKAGATNAGLFAVALLANADPDLAQKLDAWRARQADS VAPAPVREG >Mature_168_residues GDSAPQAEVSVGVIMGSQSDWPTMAHSVQILEEFGIACEVRIVSAHRTPDRLVAYAKGAADRGLKAIIAGAGGAAHLPGM VAAMTRVPVLGVPVQSAALSGVDSLYSIVQMPGGVPVATFAIGKAGATNAGLFAVALLANADPDLAQKLDAWRARQADSV APAPVREG
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=154, Percent_Identity=61.038961038961, Blast_Score=164, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6324702, Length=150, Percent_Identity=58.6666666666667, Blast_Score=168, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 17080; Mature: 16949
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSAPQAEVSVGVIMGSQSDWPTMAHSVQILEEFGIACEVRIVSAHRTPDRLVAYAKGA CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCC ADRGLKAIIAGAGGAAHLPGMVAAMTRVPVLGVPVQSAALSGVDSLYSIVQMPGGVPVAT CCCCCEEEEECCCCCHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEE FAIGKAGATNAGLFAVALLANADPDLAQKLDAWRARQADSVAPAPVREG EEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GDSAPQAEVSVGVIMGSQSDWPTMAHSVQILEEFGIACEVRIVSAHRTPDRLVAYAKGA CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCC ADRGLKAIIAGAGGAAHLPGMVAAMTRVPVLGVPVQSAALSGVDSLYSIVQMPGGVPVAT CCCCCEEEEECCCCCHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEE FAIGKAGATNAGLFAVALLANADPDLAQKLDAWRARQADSVAPAPVREG EEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]