Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487846

Identifier: 103487846

GI number: 103487846

Start: 2489685

End: 2490251

Strand: Direct

Name: 103487846

Synonym: Sala_2365

Alternate gene names: NA

Gene position: 2489685-2490251 (Clockwise)

Preceding gene: 103487845

Following gene: 103487847

Centisome position: 74.43

GC content: 72.31

Gene sequence:

>567_bases
ATGGACGCAATCATGTTCGCGCTGGTGGCGGTGCTGCTCGCCAATGCCGACGGGCGCAGCGGGATCGCGCTCGCACAGCT
TCTCGCCGCACGACGCGACCGGCGCGTCACCGTCGGCATCGCGTTCGGCGCCTTCCTTGCCAATGCGCTCGTCGCCGCGC
TCGCCGGGGCGATCGCCAACCGGATGATCGGACCGGGGATTGCGGCGCTGTTCGTCGCGCTGGCGCTGCTGTCGGGAGCC
GCCGCGCTGTTGTGGCCGATGAAGGCCGAGACCGCCGGGCGGCTCGCTAATGCCTCGACCGCCGAACTCGCCGTGCAGAT
GCTCGCGCGGCAGTTTGGCGACCGCAGCCATTTCCTGATCGGCGCGCTCGCGGCGACGAGCGGCGCGGGGCAATGGGCCG
CGGCGGGGGGGCTCGTCGGCTGGACGCTCGCGATGTTTCCTTTCCTCGCCTTCGGACCCGCGCTCGCCGACCGGCGCGCG
GCGCGGCTGACCCGCTGGACGGCGGCGGCGATCCTCGCGCTGTGGAGCATCCGCACCGCGCTCGGAGCGTTCGGATTGAT
CGGATAG

Upstream 100 bases:

>100_bases
CGGGCCGATGCCCGCCGCAATGCACGAAGCCTGGCTGGCGTCGGTCGCGACGCGGCTCGGCCATTGACGCCGACGCCCTG
ACACCGCAGATCGCGCGGCC

Downstream 100 bases:

>100_bases
AGCCACGAAGATTTCGGGTTTCATCGTTTTTGTCGATGAAACCCAGCCAAAGCTTCGATGGGAAAATGTCATCCGCCATC
CCTATATGCGCCGGGTAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIANRMIGPGIAALFVALALLSGA
AALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLIGALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRA
ARLTRWTAAAILALWSIRTALGAFGLIG

Sequences:

>Translated_188_residues
MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIANRMIGPGIAALFVALALLSGA
AALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLIGALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRA
ARLTRWTAAAILALWSIRTALGAFGLIG
>Mature_188_residues
MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIANRMIGPGIAALFVALALLSGA
AALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLIGALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRA
ARLTRWTAAAILALWSIRTALGAFGLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19155; Mature: 19155

Theoretical pI: Translated: 12.38; Mature: 12.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIAN
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
RMIGPGIAALFVALALLSGAAALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLI
HHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
GALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRAARLTRWTAAAILALWSIRTA
HHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAFGLIG
HHHHCCCC
>Mature Secondary Structure
MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIAN
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
RMIGPGIAALFVALALLSGAAALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLI
HHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
GALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRAARLTRWTAAAILALWSIRTA
HHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAFGLIG
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA