| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487846
Identifier: 103487846
GI number: 103487846
Start: 2489685
End: 2490251
Strand: Direct
Name: 103487846
Synonym: Sala_2365
Alternate gene names: NA
Gene position: 2489685-2490251 (Clockwise)
Preceding gene: 103487845
Following gene: 103487847
Centisome position: 74.43
GC content: 72.31
Gene sequence:
>567_bases ATGGACGCAATCATGTTCGCGCTGGTGGCGGTGCTGCTCGCCAATGCCGACGGGCGCAGCGGGATCGCGCTCGCACAGCT TCTCGCCGCACGACGCGACCGGCGCGTCACCGTCGGCATCGCGTTCGGCGCCTTCCTTGCCAATGCGCTCGTCGCCGCGC TCGCCGGGGCGATCGCCAACCGGATGATCGGACCGGGGATTGCGGCGCTGTTCGTCGCGCTGGCGCTGCTGTCGGGAGCC GCCGCGCTGTTGTGGCCGATGAAGGCCGAGACCGCCGGGCGGCTCGCTAATGCCTCGACCGCCGAACTCGCCGTGCAGAT GCTCGCGCGGCAGTTTGGCGACCGCAGCCATTTCCTGATCGGCGCGCTCGCGGCGACGAGCGGCGCGGGGCAATGGGCCG CGGCGGGGGGGCTCGTCGGCTGGACGCTCGCGATGTTTCCTTTCCTCGCCTTCGGACCCGCGCTCGCCGACCGGCGCGCG GCGCGGCTGACCCGCTGGACGGCGGCGGCGATCCTCGCGCTGTGGAGCATCCGCACCGCGCTCGGAGCGTTCGGATTGAT CGGATAG
Upstream 100 bases:
>100_bases CGGGCCGATGCCCGCCGCAATGCACGAAGCCTGGCTGGCGTCGGTCGCGACGCGGCTCGGCCATTGACGCCGACGCCCTG ACACCGCAGATCGCGCGGCC
Downstream 100 bases:
>100_bases AGCCACGAAGATTTCGGGTTTCATCGTTTTTGTCGATGAAACCCAGCCAAAGCTTCGATGGGAAAATGTCATCCGCCATC CCTATATGCGCCGGGTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIANRMIGPGIAALFVALALLSGA AALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLIGALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRA ARLTRWTAAAILALWSIRTALGAFGLIG
Sequences:
>Translated_188_residues MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIANRMIGPGIAALFVALALLSGA AALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLIGALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRA ARLTRWTAAAILALWSIRTALGAFGLIG >Mature_188_residues MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIANRMIGPGIAALFVALALLSGA AALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLIGALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRA ARLTRWTAAAILALWSIRTALGAFGLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19155; Mature: 19155
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIAN CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH RMIGPGIAALFVALALLSGAAALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLI HHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH GALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRAARLTRWTAAAILALWSIRTA HHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFGLIG HHHHCCCC >Mature Secondary Structure MDAIMFALVAVLLANADGRSGIALAQLLAARRDRRVTVGIAFGAFLANALVAALAGAIAN CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH RMIGPGIAALFVALALLSGAAALLWPMKAETAGRLANASTAELAVQMLARQFGDRSHFLI HHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH GALAATSGAGQWAAAGGLVGWTLAMFPFLAFGPALADRRAARLTRWTAAAILALWSIRTA HHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFGLIG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA