Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487836

Identifier: 103487836

GI number: 103487836

Start: 2479796

End: 2480215

Strand: Reverse

Name: 103487836

Synonym: Sala_2355

Alternate gene names: NA

Gene position: 2480215-2479796 (Counterclockwise)

Preceding gene: 103487837

Following gene: 103487833

Centisome position: 74.14

GC content: 74.76

Gene sequence:

>420_bases
GTGAACCGGACCACCGCCATCCTGGCTGCCTCGATCGTCGCCACCACTTTGTCGGCCTGCGGGTCGAACAGCCTTTTCAG
CCGCGACCGCCCCGACGAGATGATGGTGTCGCGCCAGGCGCCGCTCGTCGTGCCGCCCGATTTCGCGCTGACCCCGCCCG
CGCCCGGCACCGCGCGCCCCGGCGGCGAATCGACCGCCGAACAGACGCTGCGCGCGCTCTTCGGCGGCCCCTCGGCGCGC
AGCCCCGGCGAAGCGCAGATCATCGGCAGCGCCGACGGCGCGCGCGCCGACCCCGGCATCCGCAGCCAGGTCGGCAGCCC
CGACACGCAGGTCGTCGACAAGGGCCTCATCGTCCGCGACATTCTCGCCGCCCCCGAAGGCGACGGCCGCGACGCGCAGG
CGGCCATTCCGGGGGCCTAG

Upstream 100 bases:

>100_bases
GCGCGCTGCTCTTGGGCGAAAAGGCGGGCCAAGCAGACGCCAAGCCGTCTGTCGATTAATTGGGGCACCGCGTAAACGGG
GCGCATAGGAGAGTATTTTA

Downstream 100 bases:

>100_bases
GCGCCACAGAGCTTTGAAGGAACGGGCGGCTGCGGCCGCCCTTTTCATGCCCGATGGTCGCCCGGCAGGGACGACGGCCG
TGGGTGCGCACTCGCCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNRTTAILAASIVATTLSACGSNSLFSRDRPDEMMVSRQAPLVVPPDFALTPPAPGTARPGGESTAEQTLRALFGGPSAR
SPGEAQIIGSADGARADPGIRSQVGSPDTQVVDKGLIVRDILAAPEGDGRDAQAAIPGA

Sequences:

>Translated_139_residues
MNRTTAILAASIVATTLSACGSNSLFSRDRPDEMMVSRQAPLVVPPDFALTPPAPGTARPGGESTAEQTLRALFGGPSAR
SPGEAQIIGSADGARADPGIRSQVGSPDTQVVDKGLIVRDILAAPEGDGRDAQAAIPGA
>Mature_139_residues
MNRTTAILAASIVATTLSACGSNSLFSRDRPDEMMVSRQAPLVVPPDFALTPPAPGTARPGGESTAEQTLRALFGGPSAR
SPGEAQIIGSADGARADPGIRSQVGSPDTQVVDKGLIVRDILAAPEGDGRDAQAAIPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14047; Mature: 14047

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTTAILAASIVATTLSACGSNSLFSRDRPDEMMVSRQAPLVVPPDFALTPPAPGTARP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC
GGESTAEQTLRALFGGPSARSPGEAQIIGSADGARADPGIRSQVGSPDTQVVDKGLIVRD
CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHHCCHHHHH
ILAAPEGDGRDAQAAIPGA
HHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRTTAILAASIVATTLSACGSNSLFSRDRPDEMMVSRQAPLVVPPDFALTPPAPGTARP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC
GGESTAEQTLRALFGGPSARSPGEAQIIGSADGARADPGIRSQVGSPDTQVVDKGLIVRD
CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHHCCHHHHH
ILAAPEGDGRDAQAAIPGA
HHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA