| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487833
Identifier: 103487833
GI number: 103487833
Start: 2476180
End: 2477190
Strand: Reverse
Name: 103487833
Synonym: Sala_2352
Alternate gene names: NA
Gene position: 2477190-2476180 (Counterclockwise)
Preceding gene: 103487836
Following gene: 103487831
Centisome position: 74.05
GC content: 65.08
Gene sequence:
>1011_bases ATGTCCATGCCCCGTCCGACGCGCCTTCGCTCCATCATGCGCCCGTTGATTTCGTTTTTCGCCGCCGCGCTGGCAATCGG CCCGGCTTCCGCCGAGGAAACGTCGCCCGCTGACGGTCTCGAAGCAGAGGCGACCATCGCCGCTGCGAATGGGTTCGACG ACGCCCCGCGCTACCTCCAGGACAGCGACATCGACGAAAATATCCTGCTGCCCGCGGCGCGGCCCGACGACGACGATCCC GAACGGACCTGGTCGCGCGACTATTTCGCGGTCGCCGCGGGCGTGCTCAGCACGCCCGAATATAATGGCGCCGACGACCG CCGCCTCGTCCCCGCCATCTATCTGCGCGGGCGCATCAGCGGTTATTCCTTCTCGACGCGCGGCACCAATTTCCAGGTCG ACCTGATCCGTCAGCGGCGCGGGCAGAAAACCGACTTCAAGTTCGGCCCGATCATCAGCCTGCGCAGCGACCGCACCGGC AAGATCGACGATCCGCAGGTTGCGGCGCTCGGCAAGCGCAAGATTGCTGTCGAAACCGGGCTTTTCGCGGGAGTATCGCA CACCGGCGTCATCACCAGCGCCTATGACCAGATCGCCTTTCGCGTCGTGGCGCTCAAGGATATTTCGGGCCGCCACGGCA GCTGGGCCGCCTCACCGACGATCGATTACGGCACCCCGCTGTCGAAGCGCGCCTATGTCGGCGTGTCGGCCTCGGTCAAC TTCTATGGCAAGGGCTTTGGCCGCTATTATTACGACATCGACCCGGCGGACAGCGCGGCGAGCGGGCTGCCCGTCTATGA CGGAGCGGGGAAAAAGGCGACCGCGGGCAAATATACGTTGGGGATTGCGGGCGCCTATGCGCTGTCGGGCGATCTGCGCA AGGGTTTCGTCCTGCTCGGCGGCGCGCAATATGGCCGCCTTGGCAAAGGTTTCGCCCGCTCACCGATCGTAGCCGACGTT GGCGATGCCGACCAGTGGCTGTTCGGCGGCGGCTTGGCATATCAGTTCTGA
Upstream 100 bases:
>100_bases GGAAGCAAAATCGCCCCGTCGCAAGACGAAGTCGTTGCAATGGCGCGCGCTTTACTTACACCCTTGGCAAGAGGGGCAAG ATCATAGGAATGACCAACGC
Downstream 100 bases:
>100_bases AAGGTTGCGGGCGATAGGCGCCGTACCCCGGCGAAAGCCGGGGTCCAGAGCGGGATAAGCCAACGCCTGCTCCTGGGCGC CCTGGGCCCCGGCTTTCGCC
Product: MltA-interacting MipA
Products: NA
Alternate protein names: MipA Family Protein; MltA-Interacting MipA Family Protein
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSMPRPTRLRSIMRPLISFFAAALAIGPASAEETSPADGLEAEATIAAANGFDDAPRYLQDSDIDENILLPAARPDDDDP ERTWSRDYFAVAAGVLSTPEYNGADDRRLVPAIYLRGRISGYSFSTRGTNFQVDLIRQRRGQKTDFKFGPIISLRSDRTG KIDDPQVAALGKRKIAVETGLFAGVSHTGVITSAYDQIAFRVVALKDISGRHGSWAASPTIDYGTPLSKRAYVGVSASVN FYGKGFGRYYYDIDPADSAASGLPVYDGAGKKATAGKYTLGIAGAYALSGDLRKGFVLLGGAQYGRLGKGFARSPIVADV GDADQWLFGGGLAYQF
Sequences:
>Translated_336_residues MSMPRPTRLRSIMRPLISFFAAALAIGPASAEETSPADGLEAEATIAAANGFDDAPRYLQDSDIDENILLPAARPDDDDP ERTWSRDYFAVAAGVLSTPEYNGADDRRLVPAIYLRGRISGYSFSTRGTNFQVDLIRQRRGQKTDFKFGPIISLRSDRTG KIDDPQVAALGKRKIAVETGLFAGVSHTGVITSAYDQIAFRVVALKDISGRHGSWAASPTIDYGTPLSKRAYVGVSASVN FYGKGFGRYYYDIDPADSAASGLPVYDGAGKKATAGKYTLGIAGAYALSGDLRKGFVLLGGAQYGRLGKGFARSPIVADV GDADQWLFGGGLAYQF >Mature_335_residues SMPRPTRLRSIMRPLISFFAAALAIGPASAEETSPADGLEAEATIAAANGFDDAPRYLQDSDIDENILLPAARPDDDDPE RTWSRDYFAVAAGVLSTPEYNGADDRRLVPAIYLRGRISGYSFSTRGTNFQVDLIRQRRGQKTDFKFGPIISLRSDRTGK IDDPQVAALGKRKIAVETGLFAGVSHTGVITSAYDQIAFRVVALKDISGRHGSWAASPTIDYGTPLSKRAYVGVSASVNF YGKGFGRYYYDIDPADSAASGLPVYDGAGKKATAGKYTLGIAGAYALSGDLRKGFVLLGGAQYGRLGKGFARSPIVADVG DADQWLFGGGLAYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35939; Mature: 35807
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPRPTRLRSIMRPLISFFAAALAIGPASAEETSPADGLEAEATIAAANGFDDAPRYLQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHCC DSDIDENILLPAARPDDDDPERTWSRDYFAVAAGVLSTPEYNGADDRRLVPAIYLRGRIS CCCCCCCEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEC GYSFSTRGTNFQVDLIRQRRGQKTDFKFGPIISLRSDRTGKIDDPQVAALGKRKIAVETG CEEEECCCCCEEEEHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCEEEEECC LFAGVSHTGVITSAYDQIAFRVVALKDISGRHGSWAASPTIDYGTPLSKRAYVGVSASVN CEECCCCCCEEHHHHHHHEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEE FYGKGFGRYYYDIDPADSAASGLPVYDGAGKKATAGKYTLGIAGAYALSGDLRKGFVLLG EEECCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEE GAQYGRLGKGFARSPIVADVGDADQWLFGGGLAYQF CCCCCCCCCCCCCCCCEEECCCCCCEEECCCEEECC >Mature Secondary Structure SMPRPTRLRSIMRPLISFFAAALAIGPASAEETSPADGLEAEATIAAANGFDDAPRYLQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHCC DSDIDENILLPAARPDDDDPERTWSRDYFAVAAGVLSTPEYNGADDRRLVPAIYLRGRIS CCCCCCCEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEC GYSFSTRGTNFQVDLIRQRRGQKTDFKFGPIISLRSDRTGKIDDPQVAALGKRKIAVETG CEEEECCCCCEEEEHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCEEEEECC LFAGVSHTGVITSAYDQIAFRVVALKDISGRHGSWAASPTIDYGTPLSKRAYVGVSASVN CEECCCCCCEEHHHHHHHEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEE FYGKGFGRYYYDIDPADSAASGLPVYDGAGKKATAGKYTLGIAGAYALSGDLRKGFVLLG EEECCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEE GAQYGRLGKGFARSPIVADVGDADQWLFGGGLAYQF CCCCCCCCCCCCCCCCEEECCCCCCEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA