| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487834
Identifier: 103487834
GI number: 103487834
Start: 2477283
End: 2477615
Strand: Direct
Name: 103487834
Synonym: Sala_2353
Alternate gene names: NA
Gene position: 2477283-2477615 (Clockwise)
Preceding gene: 103487832
Following gene: 103487835
Centisome position: 74.06
GC content: 69.07
Gene sequence:
>333_bases TTGCTTCCATGCGTCTTTCATGCACCGCTTTGCCATCGCCGCTTTTCCAGTTCCTCGCGCCGCCATGGGCTCCCCGCACG AGCCGCGCGAATGAGCCGCGTCCCTCGCCGCGTCGGCTATGCGCTGATGGTGGCCGCAGCACTGCTCGCACTCGCGATGC GACGCGGGATGGTCGCGAGCATCGGGCCCTTCCCCGTCGCCGCGATCGCGCTGCTCGTCGCGATGATCGGGGTGATGCTG GTGTTCACCGACCTGATGGTGCGCGGGCTTTACGCGCAGGTGGACGCGGCGAAGCGGCAAGGCGACGAGGAGCGCGACGG GCCGGGCGACTGA
Upstream 100 bases:
>100_bases ATGGACATGCGTTGGTCATTCCTATGATCTTGCCCCTCTTGCCAAGGGTGTAAGTAAAGCGCGCGCCATTGCAACGACTT CGTCTTGCGACGGGGCGATT
Downstream 100 bases:
>100_bases ACCCTTTTCGTTCGACACCCCATGCGCTTGGCGGTATGACGGCGCGATGACCGACCGCCCGCATACGCCGCTGCTCGACA CGGTGGATGTCCCCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MLPCVFHAPLCHRRFSSSSRRHGLPARAARMSRVPRRVGYALMVAAALLALAMRRGMVASIGPFPVAAIALLVAMIGVML VFTDLMVRGLYAQVDAAKRQGDEERDGPGD
Sequences:
>Translated_110_residues MLPCVFHAPLCHRRFSSSSRRHGLPARAARMSRVPRRVGYALMVAAALLALAMRRGMVASIGPFPVAAIALLVAMIGVML VFTDLMVRGLYAQVDAAKRQGDEERDGPGD >Mature_110_residues MLPCVFHAPLCHRRFSSSSRRHGLPARAARMSRVPRRVGYALMVAAALLALAMRRGMVASIGPFPVAAIALLVAMIGVML VFTDLMVRGLYAQVDAAKRQGDEERDGPGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11889; Mature: 11889
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPCVFHAPLCHRRFSSSSRRHGLPARAARMSRVPRRVGYALMVAAALLALAMRRGMVAS CCCCHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC IGPFPVAAIALLVAMIGVMLVFTDLMVRGLYAQVDAAKRQGDEERDGPGD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLPCVFHAPLCHRRFSSSSRRHGLPARAARMSRVPRRVGYALMVAAALLALAMRRGMVAS CCCCHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC IGPFPVAAIALLVAMIGVMLVFTDLMVRGLYAQVDAAKRQGDEERDGPGD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA