| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487822
Identifier: 103487822
GI number: 103487822
Start: 2469115
End: 2469690
Strand: Reverse
Name: 103487822
Synonym: Sala_2341
Alternate gene names: NA
Gene position: 2469690-2469115 (Counterclockwise)
Preceding gene: 103487823
Following gene: 103487821
Centisome position: 73.83
GC content: 70.14
Gene sequence:
>576_bases ATGAACCGGACCGGGACGCGCAGGAGCCTGATGCTCGCGGGCGCGGGGTTTGTGCTGACCAGCCTCGCGATCCTGTCGGT CGGCGGTGGCGACCGTGCGGCGGCGCAGGCGCTGGCCAATCACAACAGCAATGCGCCGGTCGACTTCGCCGCTGGCAGCA TCGAGGTGCAGGACCGCGCCGACCGGGTGGTGCTCGCGGGCAATGTCCGCGTCACCCAGGCGGGGCTGGTCGTTACCGCG CCCCGAATGACGGTCGCCTATACGCGTGCGGGCGGCACCGACGTCAACCGGCTTGACGCGACCGGCGGGGTGACGGTGGT GAAGGGCGATGAATCGGCGCGTGGCAATGTCGCCATCTATGACCTCGACCGGCGGCTGATCACCATGGTGGGCAATGTCG AGCTGCGCCAGCGCGGCAACAATCTGCGCGGCGGACGGCTGGTTATCGACCTGAACAGCGGTCGCGCGACGGTCGACGGC CGCGGCGCGGCGCGGGGCCCCGACGGCAATCCGGTCGCGGGCGGCACGGGCGGGCGCGTCACCGGTACCTTTACCGTACC GGAAAGAAAGCAGTAA
Upstream 100 bases:
>100_bases TCGGGCAATTTTCGGCCAACGCGCTGTCCGCCGACCTCGACAAGCGGATTGTCCGGCTGGAGGGCAATGCCCGGCTGCGG ATCAACCAGGGAGCGATCAA
Downstream 100 bases:
>100_bases CCAGCGCTTTTCACGGCTCGGCAACCCTGCGCCATCACCATGGCCGACGGGTCCAGAACCATTGCGGTGCCGGGGGGCGA CACCGCGTCCTGAAAGGCGA
Product: OstA-like protein
Products: NA
Alternate protein names: OstA Family Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNRTGTRRSLMLAGAGFVLTSLAILSVGGGDRAAAQALANHNSNAPVDFAAGSIEVQDRADRVVLAGNVRVTQAGLVVTA PRMTVAYTRAGGTDVNRLDATGGVTVVKGDESARGNVAIYDLDRRLITMVGNVELRQRGNNLRGGRLVIDLNSGRATVDG RGAARGPDGNPVAGGTGGRVTGTFTVPERKQ
Sequences:
>Translated_191_residues MNRTGTRRSLMLAGAGFVLTSLAILSVGGGDRAAAQALANHNSNAPVDFAAGSIEVQDRADRVVLAGNVRVTQAGLVVTA PRMTVAYTRAGGTDVNRLDATGGVTVVKGDESARGNVAIYDLDRRLITMVGNVELRQRGNNLRGGRLVIDLNSGRATVDG RGAARGPDGNPVAGGTGGRVTGTFTVPERKQ >Mature_191_residues MNRTGTRRSLMLAGAGFVLTSLAILSVGGGDRAAAQALANHNSNAPVDFAAGSIEVQDRADRVVLAGNVRVTQAGLVVTA PRMTVAYTRAGGTDVNRLDATGGVTVVKGDESARGNVAIYDLDRRLITMVGNVELRQRGNNLRGGRLVIDLNSGRATVDG RGAARGPDGNPVAGGTGGRVTGTFTVPERKQ
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19664; Mature: 19664
Theoretical pI: Translated: 11.74; Mature: 11.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTGTRRSLMLAGAGFVLTSLAILSVGGGDRAAAQALANHNSNAPVDFAAGSIEVQDRA CCCCCCCEEEEEECCHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCEEEECCEEEECCCC DRVVLAGNVRVTQAGLVVTAPRMTVAYTRAGGTDVNRLDATGGVTVVKGDESARGNVAIY CEEEEECCEEEEECCEEEECCCEEEEEEECCCCCCCEEECCCCEEEEECCCCCCCCEEEE DLDRRLITMVGNVELRQRGNNLRGGRLVIDLNSGRATVDGRGAARGPDGNPVAGGTGGRV ECCCEEEEEECCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEE TGTFTVPERKQ EEEEECCCCCC >Mature Secondary Structure MNRTGTRRSLMLAGAGFVLTSLAILSVGGGDRAAAQALANHNSNAPVDFAAGSIEVQDRA CCCCCCCEEEEEECCHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCEEEECCEEEECCCC DRVVLAGNVRVTQAGLVVTAPRMTVAYTRAGGTDVNRLDATGGVTVVKGDESARGNVAIY CEEEEECCEEEEECCEEEECCCEEEEEEECCCCCCCEEECCCCEEEEECCCCCCCCEEEE DLDRRLITMVGNVELRQRGNNLRGGRLVIDLNSGRATVDGRGAARGPDGNPVAGGTGGRV ECCCEEEEEECCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEE TGTFTVPERKQ EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA