| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487757
Identifier: 103487757
GI number: 103487757
Start: 2397051
End: 2398985
Strand: Direct
Name: 103487757
Synonym: Sala_2276
Alternate gene names: NA
Gene position: 2397051-2398985 (Clockwise)
Preceding gene: 103487756
Following gene: 103487758
Centisome position: 71.66
GC content: 67.91
Gene sequence:
>1935_bases TTGCAGTCTGTGCGAGCCTGTATCATGCTCGTCTGGCTGGCGTTGACGTTTGCCAGCAATCCCGTCACCGCACAGACGAC CACCAGCTACAGCACAACCACCACCGGCACGATCAGCGAAAGCGCGACGCCATGCTCCGCGCCGATGCTGCGCAGCTTCA CCGTCGCAGCAAATGCCCAGGTCAGCGACGTCAACATCGGCGTCCAGTTCGCGCACACGTACCGCGGCGACATTCGCGCG ACGCTGACCTCGCCCGCGGGCACCGTGGTCGACCTCATCACCAATGTCGGCGCCTCGGCGGACAATCTCAATGTCCTGTT CGACGACGGTGCGGCGGCGAGCATCACCACGCACAACGCAAATGATTCGACCGCAACCGCCCCGCCCTATCAGCGGACCT TCGCCCCACAAGGCTCGCTTGCCGCATTCAACGGCCAGGCGTCGGGCGGGACGTGGCAGCTTTCCATCTGCGATTCGCTG AACGGCGATGCCGGCACGTTCACCCGCGCCGACCTCACGCTCACCACCGTGCCGCTTTCGCCCTATGCCGACCTGTCGCT CGCCAAGACGGTGAGCAATGCCGCCCCGGCATCGGGCGCGATCATCAATTATGTGCTGAGCGTCACCAATGCCGGCGCAT CGACGCTGACCGCGACGGGCGTGACGGTGCAGGACACGCTCCCCGCGGGCTTCGCCTTCACCGGCGCGTCGGGTTTCGGC AGTTACAACAGCACCACCGGCGTCTGGACCGTCGGCAGCGTGCCGCCGGGCGTGACACGCACCCTGACGATCAGCGGCAC CGTCGCCGCGAGCGCGGGCGCGAGCGTGACCAACAGCGCCGAAATCGCCGCCTCCTCCGCCTTCGACCCCGATTCGACCC CCGGCAATGGCGCGGCGGGCGAGGACGATGGCGACAGCGCCAGTTTCACCGTGTCGGGCACGCGCGTCGCGGGCACGCCG CCCACGCTCGTCTGCCCGGTCGGCACGACGGCGCTCGACTGGGACACGATCGCCTGGAACGCGGGCACGACGAGCGCCAG CCCGCCGCTCACCGCGATCGGTACCGCCAGCATCGGCATCGCGGTCAGCGGCGGCGTCTTCCTCAGCAACGCCACCTATG GCGGCCAGTCGCCGACGCGGCAGAATATCGTCACCGGCGGGCTGTCCCCGGCGCAATACTCGATCTTCCAGCTCGTCGAT TTCACCAGCCAGGCGGGCAGCGTCGCCACGACGATCAGCCTGCCGACCGCGGTGCCCGGCGCGCAGTTCCGCCTCTTTGA CGTCGATTATGCCGCGGGCCAGTTCGCCGACCGTGTCACCGTCACGGGCAGCTATAATGGCGCGCCCGTGACGCCCATCC TCACTAACGGCACCGCCAATTATGTCATCGGCAACAGCGCCTATGGCGACGTGCTGTCGACCGACGCCAGCGGCAACGGC AATATCACCGTCACCTTCGCCGCGCCGGTCGACACGATCGTCATCGACTATGGCAGCCACGCCCTTGCCCCCGCCAATCC GGGGCAGCAGGGCATGGCGCTCCACGACATCATCTTCTGCCGTCCGACCGCCAATCTCACGGTCGCCAAGACGAGCAGCA TCGTCAGCGATCCGGTGGGCGGCGCCACCAATCCAAAGGCGATTCCCGGCGCGACGATGCGTTACTGCATTCTCGTCACC AACAATGGCAGCGGCACCGCGACCGCGATCAATATCGCCGACGCGCTGCCCGCGCGCACGACCTTCGTTCCCGGCTCGCT GCGCAGCGGCACGAGCTGCGCCGCCGCGACGACGGTCGAGGACGACAACGCCAGCGGCGGCGACGAAAGCGACCCTTTCG GCGCCTCGTTCGCGGGCAGCGCGATCGCCGCGAGCACAGCCACACTCGCCCCCGGCGGCGCGATGGCGATCGCTTTCACC GTCACGATCGACTGA
Upstream 100 bases:
>100_bases CAGACTCCTTGCCTTAACCCGATATTAGCCATCCTGCGGCCATAGCGACGCCATGCAACGGCGGGACCAGAGCCGATACC GCTGGCGTGGGGGCCAGTGT
Downstream 100 bases:
>100_bases TCGCACGGCCCCGATTGCATTCTATACCGGATAGTCTAAATGCGCGAAATGAGCACGCGCACCGCTTCGGACCGCCACGA TCCCGTCATCGAACATCGCG
Product: proprotein convertase, P
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQVSDVNIGVQFAHTYRGDIRA TLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNANDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSL NGDAGTFTRADLTLTTVPLSPYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAGEDDGDSASFTVSGTRVAGTP PTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGIAVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVD FTSQAGSVATTISLPTAVPGAQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVGGATNPKAIPGATMRYCILVT NNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVEDDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFT VTID
Sequences:
>Translated_644_residues MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQVSDVNIGVQFAHTYRGDIRA TLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNANDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSL NGDAGTFTRADLTLTTVPLSPYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAGEDDGDSASFTVSGTRVAGTP PTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGIAVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVD FTSQAGSVATTISLPTAVPGAQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVGGATNPKAIPGATMRYCILVT NNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVEDDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFT VTID >Mature_644_residues MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQVSDVNIGVQFAHTYRGDIRA TLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNANDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSL NGDAGTFTRADLTLTTVPLSPYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAGEDDGDSASFTVSGTRVAGTP PTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGIAVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVD FTSQAGSVATTISLPTAVPGAQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVGGATNPKAIPGATMRYCILVT NNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVEDDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFT VTID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64086; Mature: 64086
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQ CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCHHEEEEEECCCE VSDVNIGVQFAHTYRGDIRATLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNA EEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCC NDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSLNGDAGTFTRADLTLTTVPLS CCCCCCCCCCHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCC PYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG CCCCCHHHHHHHCCCCCCCHHEEEEEECCCCCCCEEEECCEEEECCCCCCEEEECCCCCC SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAG CCCCCCCEEEECCCCCCCEEEEEEECEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCC EDDGDSASFTVSGTRVAGTPPTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGI CCCCCCEEEEEECCEECCCCCEEEEECCCCEECCCEEEECCCCCCCCCCEEEEECCEEEE AVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVDFTSQAGSVATTISLPTAVPG EEECCEEEECCCCCCCCCCCCCEEECCCCHHHHEEEEEEHHCCCCCCEEEEEECCCCCCC AQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG CEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCC NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVG CEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCHHCCCCC GATNPKAIPGATMRYCILVTNNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVE CCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEEC DDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFTVTID CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCEEEEEEEEEEC >Mature Secondary Structure MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQ CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCHHEEEEEECCCE VSDVNIGVQFAHTYRGDIRATLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNA EEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCC NDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSLNGDAGTFTRADLTLTTVPLS CCCCCCCCCCHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCC PYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG CCCCCHHHHHHHCCCCCCCHHEEEEEECCCCCCCEEEECCEEEECCCCCCEEEECCCCCC SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAG CCCCCCCEEEECCCCCCCEEEEEEECEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCC EDDGDSASFTVSGTRVAGTPPTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGI CCCCCCEEEEEECCEECCCCCEEEEECCCCEECCCEEEECCCCCCCCCCEEEEECCEEEE AVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVDFTSQAGSVATTISLPTAVPG EEECCEEEECCCCCCCCCCCCCEEECCCCHHHHEEEEEEHHCCCCCCEEEEEECCCCCCC AQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG CEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCC NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVG CEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCHHCCCCC GATNPKAIPGATMRYCILVTNNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVE CCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEEC DDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFTVTID CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA