Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487757

Identifier: 103487757

GI number: 103487757

Start: 2397051

End: 2398985

Strand: Direct

Name: 103487757

Synonym: Sala_2276

Alternate gene names: NA

Gene position: 2397051-2398985 (Clockwise)

Preceding gene: 103487756

Following gene: 103487758

Centisome position: 71.66

GC content: 67.91

Gene sequence:

>1935_bases
TTGCAGTCTGTGCGAGCCTGTATCATGCTCGTCTGGCTGGCGTTGACGTTTGCCAGCAATCCCGTCACCGCACAGACGAC
CACCAGCTACAGCACAACCACCACCGGCACGATCAGCGAAAGCGCGACGCCATGCTCCGCGCCGATGCTGCGCAGCTTCA
CCGTCGCAGCAAATGCCCAGGTCAGCGACGTCAACATCGGCGTCCAGTTCGCGCACACGTACCGCGGCGACATTCGCGCG
ACGCTGACCTCGCCCGCGGGCACCGTGGTCGACCTCATCACCAATGTCGGCGCCTCGGCGGACAATCTCAATGTCCTGTT
CGACGACGGTGCGGCGGCGAGCATCACCACGCACAACGCAAATGATTCGACCGCAACCGCCCCGCCCTATCAGCGGACCT
TCGCCCCACAAGGCTCGCTTGCCGCATTCAACGGCCAGGCGTCGGGCGGGACGTGGCAGCTTTCCATCTGCGATTCGCTG
AACGGCGATGCCGGCACGTTCACCCGCGCCGACCTCACGCTCACCACCGTGCCGCTTTCGCCCTATGCCGACCTGTCGCT
CGCCAAGACGGTGAGCAATGCCGCCCCGGCATCGGGCGCGATCATCAATTATGTGCTGAGCGTCACCAATGCCGGCGCAT
CGACGCTGACCGCGACGGGCGTGACGGTGCAGGACACGCTCCCCGCGGGCTTCGCCTTCACCGGCGCGTCGGGTTTCGGC
AGTTACAACAGCACCACCGGCGTCTGGACCGTCGGCAGCGTGCCGCCGGGCGTGACACGCACCCTGACGATCAGCGGCAC
CGTCGCCGCGAGCGCGGGCGCGAGCGTGACCAACAGCGCCGAAATCGCCGCCTCCTCCGCCTTCGACCCCGATTCGACCC
CCGGCAATGGCGCGGCGGGCGAGGACGATGGCGACAGCGCCAGTTTCACCGTGTCGGGCACGCGCGTCGCGGGCACGCCG
CCCACGCTCGTCTGCCCGGTCGGCACGACGGCGCTCGACTGGGACACGATCGCCTGGAACGCGGGCACGACGAGCGCCAG
CCCGCCGCTCACCGCGATCGGTACCGCCAGCATCGGCATCGCGGTCAGCGGCGGCGTCTTCCTCAGCAACGCCACCTATG
GCGGCCAGTCGCCGACGCGGCAGAATATCGTCACCGGCGGGCTGTCCCCGGCGCAATACTCGATCTTCCAGCTCGTCGAT
TTCACCAGCCAGGCGGGCAGCGTCGCCACGACGATCAGCCTGCCGACCGCGGTGCCCGGCGCGCAGTTCCGCCTCTTTGA
CGTCGATTATGCCGCGGGCCAGTTCGCCGACCGTGTCACCGTCACGGGCAGCTATAATGGCGCGCCCGTGACGCCCATCC
TCACTAACGGCACCGCCAATTATGTCATCGGCAACAGCGCCTATGGCGACGTGCTGTCGACCGACGCCAGCGGCAACGGC
AATATCACCGTCACCTTCGCCGCGCCGGTCGACACGATCGTCATCGACTATGGCAGCCACGCCCTTGCCCCCGCCAATCC
GGGGCAGCAGGGCATGGCGCTCCACGACATCATCTTCTGCCGTCCGACCGCCAATCTCACGGTCGCCAAGACGAGCAGCA
TCGTCAGCGATCCGGTGGGCGGCGCCACCAATCCAAAGGCGATTCCCGGCGCGACGATGCGTTACTGCATTCTCGTCACC
AACAATGGCAGCGGCACCGCGACCGCGATCAATATCGCCGACGCGCTGCCCGCGCGCACGACCTTCGTTCCCGGCTCGCT
GCGCAGCGGCACGAGCTGCGCCGCCGCGACGACGGTCGAGGACGACAACGCCAGCGGCGGCGACGAAAGCGACCCTTTCG
GCGCCTCGTTCGCGGGCAGCGCGATCGCCGCGAGCACAGCCACACTCGCCCCCGGCGGCGCGATGGCGATCGCTTTCACC
GTCACGATCGACTGA

Upstream 100 bases:

>100_bases
CAGACTCCTTGCCTTAACCCGATATTAGCCATCCTGCGGCCATAGCGACGCCATGCAACGGCGGGACCAGAGCCGATACC
GCTGGCGTGGGGGCCAGTGT

Downstream 100 bases:

>100_bases
TCGCACGGCCCCGATTGCATTCTATACCGGATAGTCTAAATGCGCGAAATGAGCACGCGCACCGCTTCGGACCGCCACGA
TCCCGTCATCGAACATCGCG

Product: proprotein convertase, P

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQVSDVNIGVQFAHTYRGDIRA
TLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNANDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSL
NGDAGTFTRADLTLTTVPLSPYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG
SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAGEDDGDSASFTVSGTRVAGTP
PTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGIAVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVD
FTSQAGSVATTISLPTAVPGAQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG
NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVGGATNPKAIPGATMRYCILVT
NNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVEDDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFT
VTID

Sequences:

>Translated_644_residues
MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQVSDVNIGVQFAHTYRGDIRA
TLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNANDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSL
NGDAGTFTRADLTLTTVPLSPYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG
SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAGEDDGDSASFTVSGTRVAGTP
PTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGIAVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVD
FTSQAGSVATTISLPTAVPGAQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG
NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVGGATNPKAIPGATMRYCILVT
NNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVEDDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFT
VTID
>Mature_644_residues
MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQVSDVNIGVQFAHTYRGDIRA
TLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNANDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSL
NGDAGTFTRADLTLTTVPLSPYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG
SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAGEDDGDSASFTVSGTRVAGTP
PTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGIAVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVD
FTSQAGSVATTISLPTAVPGAQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG
NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVGGATNPKAIPGATMRYCILVT
NNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVEDDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFT
VTID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64086; Mature: 64086

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQ
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCHHEEEEEECCCE
VSDVNIGVQFAHTYRGDIRATLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNA
EEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCC
NDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSLNGDAGTFTRADLTLTTVPLS
CCCCCCCCCCHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCC
PYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG
CCCCCHHHHHHHCCCCCCCHHEEEEEECCCCCCCEEEECCEEEECCCCCCEEEECCCCCC
SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAG
CCCCCCCEEEECCCCCCCEEEEEEECEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCC
EDDGDSASFTVSGTRVAGTPPTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGI
CCCCCCEEEEEECCEECCCCCEEEEECCCCEECCCEEEECCCCCCCCCCEEEEECCEEEE
AVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVDFTSQAGSVATTISLPTAVPG
EEECCEEEECCCCCCCCCCCCCEEECCCCHHHHEEEEEEHHCCCCCCEEEEEECCCCCCC
AQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG
CEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCC
NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVG
CEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCHHCCCCC
GATNPKAIPGATMRYCILVTNNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVE
CCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEEC
DDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFTVTID
CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCEEEEEEEEEEC
>Mature Secondary Structure
MQSVRACIMLVWLALTFASNPVTAQTTTSYSTTTTGTISESATPCSAPMLRSFTVAANAQ
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCHHEEEEEECCCE
VSDVNIGVQFAHTYRGDIRATLTSPAGTVVDLITNVGASADNLNVLFDDGAAASITTHNA
EEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCC
NDSTATAPPYQRTFAPQGSLAAFNGQASGGTWQLSICDSLNGDAGTFTRADLTLTTVPLS
CCCCCCCCCCHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCC
PYADLSLAKTVSNAAPASGAIINYVLSVTNAGASTLTATGVTVQDTLPAGFAFTGASGFG
CCCCCHHHHHHHCCCCCCCHHEEEEEECCCCCCCEEEECCEEEECCCCCCEEEECCCCCC
SYNSTTGVWTVGSVPPGVTRTLTISGTVAASAGASVTNSAEIAASSAFDPDSTPGNGAAG
CCCCCCCEEEECCCCCCCEEEEEEECEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCC
EDDGDSASFTVSGTRVAGTPPTLVCPVGTTALDWDTIAWNAGTTSASPPLTAIGTASIGI
CCCCCCEEEEEECCEECCCCCEEEEECCCCEECCCEEEECCCCCCCCCCEEEEECCEEEE
AVSGGVFLSNATYGGQSPTRQNIVTGGLSPAQYSIFQLVDFTSQAGSVATTISLPTAVPG
EEECCEEEECCCCCCCCCCCCCEEECCCCHHHHEEEEEEHHCCCCCCEEEEEECCCCCCC
AQFRLFDVDYAAGQFADRVTVTGSYNGAPVTPILTNGTANYVIGNSAYGDVLSTDASGNG
CEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCC
NITVTFAAPVDTIVIDYGSHALAPANPGQQGMALHDIIFCRPTANLTVAKTSSIVSDPVG
CEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCHHCCCCC
GATNPKAIPGATMRYCILVTNNGSGTATAINIADALPARTTFVPGSLRSGTSCAAATTVE
CCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEEC
DDNASGGDESDPFGASFAGSAIAASTATLAPGGAMAIAFTVTID
CCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA