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The map label for this gene is rsmE [H]

Identifier: 103487756

GI number: 103487756

Start: 2396158

End: 2396907

Strand: Direct

Name: rsmE [H]

Synonym: Sala_2275

Alternate gene names: 103487756

Gene position: 2396158-2396907 (Clockwise)

Preceding gene: 103487751

Following gene: 103487757

Centisome position: 71.63

GC content: 72.8

Gene sequence:

>750_bases
ATGCCCGCGACTCCCGCCTGGCCGCCCGCCAGCACGCCCCGCCTGTTCATCGACCAGCCGCTCGGCGCCGGCAGTGCGCC
CGTGATCGACGGCGCCGCGGCCCATTATCTGCTCGGCGTCATGCGGCTGAAGGCGGGCGATCCGGTGCTGCTCTTCGACA
ACCGCAGCGGGGAATGGCTTGCGGTCGTCGCCGACGCCGCCAAACGCTCGGTTACGCTGCGCATCGAACGCCACATGCGC
GACATCGAGGCGGTGCCCGACCTCTGGCTCTGCTTCGCGCCGGTGAAAAAGGCGCGGCTCGACTGGATCATCGAAAAGGC
GACCGAGCTCGGCGTCCGCCGCCTCCAGCCCGTGATGACCGAACGCACGATCGTCGAGCGCGTCAGGCGCGAGCGGCTGG
AGGCGCAGATCATCGAGGCGTGCGAACAATGCGGCCGCACCGCGCTCCCCGCGCTTGCCGAGCCCGTCAAGCTGCCGCAG
CTGCTGAAGGCCTGGCCGGCGGAGCGCGCGCTGCTCTTCGCCGACGAAGCGGGCGGCGTGCCGATGGCGCGCCTCGCCGC
TCCCGCCCCCGCCGCGATCCTCACCGGCCCCGAAGGCGGCTTCACCGACCGCGAGCGCGCGCTGCTGGCCGCGCATCCCG
CGGTCCACCGCCTCGCCCTTGGCCCCCGCATCCTCCGCGCCGAAACCGCCGCCATCGCGGCCACCTCCCTGTGGATGGCG
CAGCACGGCGACTGGACGGACGAAGCATAG

Upstream 100 bases:

>100_bases
CAACCCCCCAGAATCCGGGCTTTTGACCCGGATCGGGACAGATCGCCGCGCGTCGCGGCAAAAGATGCACACATGATCGC
GCTCTGCTATCGCGCCCGCC

Downstream 100 bases:

>100_bases
GCGGACGTGGCCAGACTGTCCCGCCCTCGCACGAAAATGGCTCCAGACTCCTTGCCTTAACCCGATATTAGCCATCCTGC
GGCCATAGCGACGCCATGCA

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPATPAWPPASTPRLFIDQPLGAGSAPVIDGAAAHYLLGVMRLKAGDPVLLFDNRSGEWLAVVADAAKRSVTLRIERHMR
DIEAVPDLWLCFAPVKKARLDWIIEKATELGVRRLQPVMTERTIVERVRRERLEAQIIEACEQCGRTALPALAEPVKLPQ
LLKAWPAERALLFADEAGGVPMARLAAPAPAAILTGPEGGFTDRERALLAAHPAVHRLALGPRILRAETAAIAATSLWMA
QHGDWTDEA

Sequences:

>Translated_249_residues
MPATPAWPPASTPRLFIDQPLGAGSAPVIDGAAAHYLLGVMRLKAGDPVLLFDNRSGEWLAVVADAAKRSVTLRIERHMR
DIEAVPDLWLCFAPVKKARLDWIIEKATELGVRRLQPVMTERTIVERVRRERLEAQIIEACEQCGRTALPALAEPVKLPQ
LLKAWPAERALLFADEAGGVPMARLAAPAPAAILTGPEGGFTDRERALLAAHPAVHRLALGPRILRAETAAIAATSLWMA
QHGDWTDEA
>Mature_248_residues
PATPAWPPASTPRLFIDQPLGAGSAPVIDGAAAHYLLGVMRLKAGDPVLLFDNRSGEWLAVVADAAKRSVTLRIERHMRD
IEAVPDLWLCFAPVKKARLDWIIEKATELGVRRLQPVMTERTIVERVRRERLEAQIIEACEQCGRTALPALAEPVKLPQL
LKAWPAERALLFADEAGGVPMARLAAPAPAAILTGPEGGFTDRERALLAAHPAVHRLALGPRILRAETAAIAATSLWMAQ
HGDWTDEA

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=249, Percent_Identity=30.5220883534137, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 27063; Mature: 26932

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATPAWPPASTPRLFIDQPLGAGSAPVIDGAAAHYLLGVMRLKAGDPVLLFDNRSGEWL
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEE
AVVADAAKRSVTLRIERHMRDIEAVPDLWLCFAPVKKARLDWIIEKATELGVRRLQPVMT
EEEEHHHHCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERTIVERVRRERLEAQIIEACEQCGRTALPALAEPVKLPQLLKAWPAERALLFADEAGGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCCEEEEECCCCCC
PMARLAAPAPAAILTGPEGGFTDRERALLAAHPAVHRLALGPRILRAETAAIAATSLWMA
CHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QHGDWTDEA
HCCCCCCCC
>Mature Secondary Structure 
PATPAWPPASTPRLFIDQPLGAGSAPVIDGAAAHYLLGVMRLKAGDPVLLFDNRSGEWL
CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEE
AVVADAAKRSVTLRIERHMRDIEAVPDLWLCFAPVKKARLDWIIEKATELGVRRLQPVMT
EEEEHHHHCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERTIVERVRRERLEAQIIEACEQCGRTALPALAEPVKLPQLLKAWPAERALLFADEAGGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCCEEEEECCCCCC
PMARLAAPAPAAILTGPEGGFTDRERALLAAHPAVHRLALGPRILRAETAAIAATSLWMA
CHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QHGDWTDEA
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]