Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487754

Identifier: 103487754

GI number: 103487754

Start: 2393376

End: 2393957

Strand: Reverse

Name: 103487754

Synonym: Sala_2273

Alternate gene names: NA

Gene position: 2393957-2393376 (Counterclockwise)

Preceding gene: 103487755

Following gene: 103487753

Centisome position: 71.56

GC content: 65.81

Gene sequence:

>582_bases
ATGAGCCGCGCGCACGCGCCCTTGCGCCGTCTGGTCCGCCGCCTGCGGACGAGCGAGCGCGGCACCGCCTTCATCGAATT
CGCCTTTACCGCGCCGGTGTTTCTGCTCGTCCTGCTCGGCATCTTCGATTATTGCTGGCAGATGTACGCGCAGCAGGTGT
TGCAGGGGGTGGTGGCCAAGGCCGGCCGCGATGCGACGCTTGAGGGCTTCGCCGCCGACCAGAGCGCGCTCGACGCGCGG
GTCGAGGCGCAGGTGCAAAAGGTGTTCGCGAGCGCCACCGTGACCTTCAATCGCCGTGTTTTTGACGATTACAGCGATAT
CAGGCCGCTGCGCTGGGTCGATTCGAACGGCAATGGCATCCAGGACCCATCGCCCGATGATTGCTGGGAAGACGGCGGCC
GCCAGGGCAATGGCGGCGCCGACGACGTCGTCCAATATACGGTGTCGATGCGCTTCGACCGCGTGCTGCCCGTGTGGCGA
ATGCTGGGGCAGCCGCAACATACGACGCTGAGTTCGACGACGTTGCTGCGCAACCAGCCCTTTGCCGCGGGCGGCGAGGT
CGAGCCGGAGATATGCGGATGA

Upstream 100 bases:

>100_bases
GCGCGTCGTCGGGCCAGGCGTTCGAGGCCGACAATGCCGCCGAACTCAACGAACAGTTCCAGGCGATCGCGCGGCAGATT
TCCAAGCTGAGGCTGGCGCA

Downstream 100 bases:

>100_bases
CCGGCCCGATCGCTTTCGTCCGCCGGTTGCGCGGCGCCGCGCGGCGGCTGACCCAAAGCACGCGCGCCGCGGTGATGCTC
GAAATGGCGTTCGCCATTCC

Product: TadE-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSRAHAPLRRLVRRLRTSERGTAFIEFAFTAPVFLLVLLGIFDYCWQMYAQQVLQGVVAKAGRDATLEGFAADQSALDAR
VEAQVQKVFASATVTFNRRVFDDYSDIRPLRWVDSNGNGIQDPSPDDCWEDGGRQGNGGADDVVQYTVSMRFDRVLPVWR
MLGQPQHTTLSSTTLLRNQPFAAGGEVEPEICG

Sequences:

>Translated_193_residues
MSRAHAPLRRLVRRLRTSERGTAFIEFAFTAPVFLLVLLGIFDYCWQMYAQQVLQGVVAKAGRDATLEGFAADQSALDAR
VEAQVQKVFASATVTFNRRVFDDYSDIRPLRWVDSNGNGIQDPSPDDCWEDGGRQGNGGADDVVQYTVSMRFDRVLPVWR
MLGQPQHTTLSSTTLLRNQPFAAGGEVEPEICG
>Mature_192_residues
SRAHAPLRRLVRRLRTSERGTAFIEFAFTAPVFLLVLLGIFDYCWQMYAQQVLQGVVAKAGRDATLEGFAADQSALDARV
EAQVQKVFASATVTFNRRVFDDYSDIRPLRWVDSNGNGIQDPSPDDCWEDGGRQGNGGADDVVQYTVSMRFDRVLPVWRM
LGQPQHTTLSSTTLLRNQPFAAGGEVEPEICG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21487; Mature: 21356

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAHAPLRRLVRRLRTSERGTAFIEFAFTAPVFLLVLLGIFDYCWQMYAQQVLQGVVAK
CCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRDATLEGFAADQSALDARVEAQVQKVFASATVTFNRRVFDDYSDIRPLRWVDSNGNGI
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCEEEECCCCCCC
QDPSPDDCWEDGGRQGNGGADDVVQYTVSMRFDRVLPVWRMLGQPQHTTLSSTTLLRNQP
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
FAAGGEVEPEICG
CCCCCCCCCCCCC
>Mature Secondary Structure 
SRAHAPLRRLVRRLRTSERGTAFIEFAFTAPVFLLVLLGIFDYCWQMYAQQVLQGVVAK
CCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRDATLEGFAADQSALDARVEAQVQKVFASATVTFNRRVFDDYSDIRPLRWVDSNGNGI
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCEEEECCCCCCC
QDPSPDDCWEDGGRQGNGGADDVVQYTVSMRFDRVLPVWRMLGQPQHTTLSSTTLLRNQP
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
FAAGGEVEPEICG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA