| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mrp [C]
Identifier: 103487731
GI number: 103487731
Start: 2363348
End: 2364367
Strand: Direct
Name: mrp [C]
Synonym: Sala_2250
Alternate gene names: 103487731
Gene position: 2363348-2364367 (Clockwise)
Preceding gene: 103487727
Following gene: 103487732
Centisome position: 70.65
GC content: 69.8
Gene sequence:
>1020_bases ATGGCTGGCAAAGCGCGTCGGCGGCCCTATTTCGGCGCAGACATGACCGACCCCGCTCCCCTCGCCAGCATCGCCGCCGA CCTCAGCGGCGGTCGCACCTCGGGCCTGCGCTTCCTCGACGACCGGGGCACGCTCGCCATCGTCCTCGACGTCACGGGAC TTGCCGCCGACGACCGCAAACCGCTGGAGGACCGGCTGCGCGCCGGCCTGCTCGAACAGCCGGGCGTGCGCGAGGTGCGC GTCGCAATGACCGCCGAGAAAAAGACGATGACGATCATCGCGGTCGGCAGCGGCAAGGGCGGCGTCGGCAAATCGACGCT CGCCGCCAACCTCGCGGTCGCGCTTCGGCGGATCGGCGTCAAGGTCGGACTCGTCGACGCCGACATCTATGGGCCGTCGC AGCCGCGCCTGATGGCCAGCGAAGACGTCAAACCCGAAGCGCGCGGCTCGAAACTCGCGCCCGTGCCCAATGCCTATGGC GTGCCGATGCTCTCGACCGGGCAGATCGCCCAGCCGGGGCAGGCGATCGCGTGGCGTGGGCCGATGGCGGGCAAGGCGCT CGAACAGCTGGTCGATGCGAGCTGGGGCGACATCGACACGCTCGTCGTCGACCTGCCCCCCGGCACCGGCGACGTCCAGC TGACGATGATCCAGAAGCACAAGCCCGCGGGCGCGGTGATCGTCTCGACGCCGCAGGATCTGGCGCTGATGGACGCGACG CGCGCGATCAACCTGTTCCAGCAGGCCGACGTGCCGATCATCGGGCTGGTCGAAAATATGGCGGGCTATGCCTGCCCGCA TTGCGGCGAGGTCAGCGACCCGTTCGGCAGCGGCGGCGCCGAGGCGGCGGCGAAGGTGATGGGGCTCGATTTCCTCGGTC GCGTGCCGCTGGCGATGGCTATCCGCCTCGCAAGCGACGGCGGCGTCCCTCCCGCGGCCGGAACCGATCCGGCGGGCGAG CCATTCCACGCAATAGCGGCGAAGGTCGCCGAATGGCTGGATGCACGAAAGGGCAAATGA
Upstream 100 bases:
>100_bases AATCCCCGGAGGGTGCGGCGTCCCATGCTGCCTTCAATCTGGTCGCTCATATTGCTTTTATAGGGGCGGCGGGCGCGATT AACAGGGGGTGCGCGCGAAA
Downstream 100 bases:
>100_bases TGGCGATCAACGACGAGGGCGAAATCCGCGAACTGCTTGGGGCGCCGCGCCGCATCGCGGTGGTCGGCGCCTCGCCCAAC CCCGCGCGTCCCTCGAACGG
Product: chromosome partitioning ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MAGKARRRPYFGADMTDPAPLASIAADLSGGRTSGLRFLDDRGTLAIVLDVTGLAADDRKPLEDRLRAGLLEQPGVREVR VAMTAEKKTMTIIAVGSGKGGVGKSTLAANLAVALRRIGVKVGLVDADIYGPSQPRLMASEDVKPEARGSKLAPVPNAYG VPMLSTGQIAQPGQAIAWRGPMAGKALEQLVDASWGDIDTLVVDLPPGTGDVQLTMIQKHKPAGAVIVSTPQDLALMDAT RAINLFQQADVPIIGLVENMAGYACPHCGEVSDPFGSGGAEAAAKVMGLDFLGRVPLAMAIRLASDGGVPPAAGTDPAGE PFHAIAAKVAEWLDARKGK
Sequences:
>Translated_339_residues MAGKARRRPYFGADMTDPAPLASIAADLSGGRTSGLRFLDDRGTLAIVLDVTGLAADDRKPLEDRLRAGLLEQPGVREVR VAMTAEKKTMTIIAVGSGKGGVGKSTLAANLAVALRRIGVKVGLVDADIYGPSQPRLMASEDVKPEARGSKLAPVPNAYG VPMLSTGQIAQPGQAIAWRGPMAGKALEQLVDASWGDIDTLVVDLPPGTGDVQLTMIQKHKPAGAVIVSTPQDLALMDAT RAINLFQQADVPIIGLVENMAGYACPHCGEVSDPFGSGGAEAAAKVMGLDFLGRVPLAMAIRLASDGGVPPAAGTDPAGE PFHAIAAKVAEWLDARKGK >Mature_338_residues AGKARRRPYFGADMTDPAPLASIAADLSGGRTSGLRFLDDRGTLAIVLDVTGLAADDRKPLEDRLRAGLLEQPGVREVRV AMTAEKKTMTIIAVGSGKGGVGKSTLAANLAVALRRIGVKVGLVDADIYGPSQPRLMASEDVKPEARGSKLAPVPNAYGV PMLSTGQIAQPGQAIAWRGPMAGKALEQLVDASWGDIDTLVVDLPPGTGDVQLTMIQKHKPAGAVIVSTPQDLALMDATR AINLFQQADVPIIGLVENMAGYACPHCGEVSDPFGSGGAEAAAKVMGLDFLGRVPLAMAIRLASDGGVPPAAGTDPAGEP FHAIAAKVAEWLDARKGK
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=223, Percent_Identity=47.5336322869955, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI6912540, Length=213, Percent_Identity=41.3145539906103, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI118572611, Length=282, Percent_Identity=35.4609929078014, Blast_Score=163, Evalue=2e-40, Organism=Escherichia coli, GI87082045, Length=262, Percent_Identity=44.2748091603053, Blast_Score=206, Evalue=2e-54, Organism=Caenorhabditis elegans, GI25143050, Length=225, Percent_Identity=39.1111111111111, Blast_Score=151, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6322188, Length=215, Percent_Identity=36.7441860465116, Blast_Score=159, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6321347, Length=227, Percent_Identity=38.7665198237885, Blast_Score=139, Evalue=8e-34, Organism=Drosophila melanogaster, GI24667611, Length=217, Percent_Identity=37.3271889400922, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI221511043, Length=249, Percent_Identity=33.7349397590361, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI19921440, Length=289, Percent_Identity=35.6401384083045, Blast_Score=147, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 35022; Mature: 34891
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKARRRPYFGADMTDPAPLASIAADLSGGRTSGLRFLDDRGTLAIVLDVTGLAADDRK CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC PLEDRLRAGLLEQPGVREVRVAMTAEKKTMTIIAVGSGKGGVGKSTLAANLAVALRRIGV CHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCE KVGLVDADIYGPSQPRLMASEDVKPEARGSKLAPVPNAYGVPMLSTGQIAQPGQAIAWRG EEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECC PMAGKALEQLVDASWGDIDTLVVDLPPGTGDVQLTMIQKHKPAGAVIVSTPQDLALMDAT CCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHH RAINLFQQADVPIIGLVENMAGYACPHCGEVSDPFGSGGAEAAAKVMGLDFLGRVPLAMA HHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHE IRLASDGGVPPAAGTDPAGEPFHAIAAKVAEWLDARKGK EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGKARRRPYFGADMTDPAPLASIAADLSGGRTSGLRFLDDRGTLAIVLDVTGLAADDRK CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC PLEDRLRAGLLEQPGVREVRVAMTAEKKTMTIIAVGSGKGGVGKSTLAANLAVALRRIGV CHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCE KVGLVDADIYGPSQPRLMASEDVKPEARGSKLAPVPNAYGVPMLSTGQIAQPGQAIAWRG EEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECC PMAGKALEQLVDASWGDIDTLVVDLPPGTGDVQLTMIQKHKPAGAVIVSTPQDLALMDAT CCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHH RAINLFQQADVPIIGLVENMAGYACPHCGEVSDPFGSGGAEAAAKVMGLDFLGRVPLAMA HHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHE IRLASDGGVPPAAGTDPAGEPFHAIAAKVAEWLDARKGK EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]