Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is cicA [H]

Identifier: 103487717

GI number: 103487717

Start: 2349669

End: 2350379

Strand: Direct

Name: cicA [H]

Synonym: Sala_2236

Alternate gene names: 103487717

Gene position: 2349669-2350379 (Clockwise)

Preceding gene: 103487716

Following gene: 103487718

Centisome position: 70.24

GC content: 72.86

Gene sequence:

>711_bases
ATGACCGACACCCCGCCCCGCGTCGCCGTCTATGACCTCGACCGCACCGTGCTGCGCACCCCGACCTTCACGCTGTTCCT
GCTGTGGGCGGCGTGGCGCGACGCACCGTGGCGGCTGCTGCTGCTCCCGGCGCTGGCGGCGCTGATGATCGGCCATGCGC
TCGGCCTCTATGGCCGCGACCGGTTCAAGCCCGCGGCGATCCGGCTGATGCTCGGCGCCAGCATCGCGCCGACGCGCGCC
CGGCGGCTCGCCGTGCGGTTCGCCGCGTGGCGCGTGCCGCGCGACGTGCCGCCGGGCGCCGCCGCCTGCATCGCGCGCGA
CCGCGCCGAAGGCTTCCGGCTGCTGATGGCGACCGCGGCGCCCGAGTTTTACGCGGGCGCAATCGCCGACGCGCTCGGTT
TCGATGCCATTGTCGCCTCGCGCCATCGCCGCGACGCGGACGGCAACTGGCTGCCGGCGCTCGACGGCTCCAATTGCTAT
GGCGCCGAAAAGGCGCGGCGCGTCGCCGAATGGCTCGCCGCCAACGGCGCCGGGAACGCGCATATCCGCGCCTATTCGGA
TCATGTCAGCGACGCGCCGACCTTTGCGCTGGCGCGCGAGGCGTGGCTCGTCGGGCGTAGCGCCAAGGTTGTGCGGCTTG
CCGCCCAACATGGCTGGCAGGTCGCCGATTTCGAGGATGCCGCCGCAGGGGCGTCAACGGAGGTTCGTTGA

Upstream 100 bases:

>100_bases
CGGCGATCTGGCTGGCGCTGCGCTTTGCGCTGCCGCTCGCCGATCGCGCCTCGCTCGGCAAGACGGCGCGCCGCCTCCGC
CTGATCGGACCCGCCGACCG

Downstream 100 bases:

>100_bases
TGCGCATCCTCTTCCTCTTCATCGGCGAGCCGCACCACCTGTTCCACGCGCTGCCCATCGCCGCCGAAATGGCCGCGAAG
GGTCAGCCCGTCGAGGTCGC

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTDTPPRVAVYDLDRTVLRTPTFTLFLLWAAWRDAPWRLLLLPALAALMIGHALGLYGRDRFKPAAIRLMLGASIAPTRA
RRLAVRFAAWRVPRDVPPGAAACIARDRAEGFRLLMATAAPEFYAGAIADALGFDAIVASRHRRDADGNWLPALDGSNCY
GAEKARRVAEWLAANGAGNAHIRAYSDHVSDAPTFALAREAWLVGRSAKVVRLAAQHGWQVADFEDAAAGASTEVR

Sequences:

>Translated_236_residues
MTDTPPRVAVYDLDRTVLRTPTFTLFLLWAAWRDAPWRLLLLPALAALMIGHALGLYGRDRFKPAAIRLMLGASIAPTRA
RRLAVRFAAWRVPRDVPPGAAACIARDRAEGFRLLMATAAPEFYAGAIADALGFDAIVASRHRRDADGNWLPALDGSNCY
GAEKARRVAEWLAANGAGNAHIRAYSDHVSDAPTFALAREAWLVGRSAKVVRLAAQHGWQVADFEDAAAGASTEVR
>Mature_235_residues
TDTPPRVAVYDLDRTVLRTPTFTLFLLWAAWRDAPWRLLLLPALAALMIGHALGLYGRDRFKPAAIRLMLGASIAPTRAR
RLAVRFAAWRVPRDVPPGAAACIARDRAEGFRLLMATAAPEFYAGAIADALGFDAIVASRHRRDADGNWLPALDGSNCYG
AEKARRVAEWLAANGAGNAHIRAYSDHVSDAPTFALAREAWLVGRSAKVVRLAAQHGWQVADFEDAAAGASTEVR

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25626; Mature: 25494

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTPPRVAVYDLDRTVLRTPTFTLFLLWAAWRDAPWRLLLLPALAALMIGHALGLYGRD
CCCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
RFKPAAIRLMLGASIAPTRARRLAVRFAAWRVPRDVPPGAAACIARDRAEGFRLLMATAA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCC
PEFYAGAIADALGFDAIVASRHRRDADGNWLPALDGSNCYGAEKARRVAEWLAANGAGNA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC
HIRAYSDHVSDAPTFALAREAWLVGRSAKVVRLAAQHGWQVADFEDAAAGASTEVR
EEEEECCCCCCCCHHHHHHHHHHCCCCHHHEEEHHHCCCEECCCHHHCCCCCCCCC
>Mature Secondary Structure 
TDTPPRVAVYDLDRTVLRTPTFTLFLLWAAWRDAPWRLLLLPALAALMIGHALGLYGRD
CCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
RFKPAAIRLMLGASIAPTRARRLAVRFAAWRVPRDVPPGAAACIARDRAEGFRLLMATAA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCC
PEFYAGAIADALGFDAIVASRHRRDADGNWLPALDGSNCYGAEKARRVAEWLAANGAGNA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC
HIRAYSDHVSDAPTFALAREAWLVGRSAKVVRLAAQHGWQVADFEDAAAGASTEVR
EEEEECCCCCCCCHHHHHHHHHHCCCCHHHEEEHHHCCCEECCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11169108 [H]