Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487714

Identifier: 103487714

GI number: 103487714

Start: 2346728

End: 2347093

Strand: Reverse

Name: 103487714

Synonym: Sala_2233

Alternate gene names: NA

Gene position: 2347093-2346728 (Counterclockwise)

Preceding gene: 103487715

Following gene: 103487713

Centisome position: 70.16

GC content: 67.21

Gene sequence:

>366_bases
GTGCGCCTCGAATCGCCGACGCCCGATGGCCGTCCGCGCGCGCGGGTGCGCATGGTCCCCGAACGCAAGCACAGCAATTT
GGGCGACAATGTCCATGGCGCGGTGACACTGGCGCTCGTCGATATCGCGCTGTTCGCGGCGTCGCACCAATTCGGCTCGC
TCAACGCCGGTCATTCGGTGACGCTCGACCTGTCGACGCAGTTCGTCGGCGCCGGCCGCGTCGGTGAGCCGCTCGACGCG
GTGGTCGAACTGGTACGCGAAACGGGGCGGCTGATCTTCCTGCGTGGGCTGGTCGTGCAGGGCGCCGATGACAGCCATAT
CGTGCTGAGTTTTGCCGGAACGATCCGCAAGGCCAGCACCGGGTGA

Upstream 100 bases:

>100_bases
GCGCCGCGATCATTTCAGCGCCGCGGAGCTGGACGGCGGCTGGATCAGCTGGGATCTGAAAGACGCGACGCGCTTCAACG
CCTTCATCGAGCCGCTGACG

Downstream 100 bases:

>100_bases
CCAGCGTTCTTGCTGCTTACGACGCGCTCGTCGCCGCGGGCGAGCTGCGCCCCGACCCGGAGCAGCGCGCCGCCGCGGTC
AGGCTGAACCAGTTGCAGGA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRLESPTPDGRPRARVRMVPERKHSNLGDNVHGAVTLALVDIALFAASHQFGSLNAGHSVTLDLSTQFVGAGRVGEPLDA
VVELVRETGRLIFLRGLVVQGADDSHIVLSFAGTIRKASTG

Sequences:

>Translated_121_residues
MRLESPTPDGRPRARVRMVPERKHSNLGDNVHGAVTLALVDIALFAASHQFGSLNAGHSVTLDLSTQFVGAGRVGEPLDA
VVELVRETGRLIFLRGLVVQGADDSHIVLSFAGTIRKASTG
>Mature_121_residues
MRLESPTPDGRPRARVRMVPERKHSNLGDNVHGAVTLALVDIALFAASHQFGSLNAGHSVTLDLSTQFVGAGRVGEPLDA
VVELVRETGRLIFLRGLVVQGADDSHIVLSFAGTIRKASTG

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12851; Mature: 12851

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLESPTPDGRPRARVRMVPERKHSNLGDNVHGAVTLALVDIALFAASHQFGSLNAGHSV
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
TLDLSTQFVGAGRVGEPLDAVVELVRETGRLIFLRGLVVQGADDSHIVLSFAGTIRKAST
EEEECCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCC
G
C
>Mature Secondary Structure
MRLESPTPDGRPRARVRMVPERKHSNLGDNVHGAVTLALVDIALFAASHQFGSLNAGHSV
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
TLDLSTQFVGAGRVGEPLDAVVELVRETGRLIFLRGLVVQGADDSHIVLSFAGTIRKAST
EEEECCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA