| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487683
Identifier: 103487683
GI number: 103487683
Start: 2314092
End: 2314496
Strand: Reverse
Name: 103487683
Synonym: Sala_2202
Alternate gene names: NA
Gene position: 2314496-2314092 (Counterclockwise)
Preceding gene: 103487684
Following gene: 103487680
Centisome position: 69.19
GC content: 66.42
Gene sequence:
>405_bases TTGGACGAGATCCTGGTCGATTGGGATGAGTTTCGCGCGACGCGCACCCAGCTGGGGGCCGCTTTCGTGCGCATTCTCGG CTATTTTCGCGAGGACGGCACCAAATCGGTCGCCGCGATCGAAGAGGCCATGCGCGCGCGCGATCCGCGCGGGCTGGTGA TGCCCGCGCACACGCTGAAAAGCGAAGCGCGCCAGTTCGGCGGCGAAAAACTAGGCGCGCTCGCCGAGGACATCGAAATG TTCGCGCGCCACTGCGTCGAAAGCCAGACAAGCCCCGACGAATATCTGCCGCGCGTCGTCGCGCTGCGTCCGCTGTTCGA ACAAACGCTCGCCGCGCTGGAGCGCGAGGCCAATCCGCTGGTCCAGCGCCGCCCCGCCACTTTCGGTCGCGCCGTCGGTT ACTGA
Upstream 100 bases:
>100_bases TTTCGCTGGGACGGGCGCGGTTCGTAACGTCTTTTTTACCGACTTTGGGGCATGGGTCGGTCGGGACCACGACCGATTTG AACACCAAGGGACGAAAGCA
Downstream 100 bases:
>100_bases CCGACGCGCCGTTTCAGCCCGGCAAGCGTTTTCGCATCGGCTGCACCTGCCCGCGCGACAGGCTGCGCCACAGCCACTCG AGCGGGCCATATTGAAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MDEILVDWDEFRATRTQLGAAFVRILGYFREDGTKSVAAIEEAMRARDPRGLVMPAHTLKSEARQFGGEKLGALAEDIEM FARHCVESQTSPDEYLPRVVALRPLFEQTLAALEREANPLVQRRPATFGRAVGY
Sequences:
>Translated_134_residues MDEILVDWDEFRATRTQLGAAFVRILGYFREDGTKSVAAIEEAMRARDPRGLVMPAHTLKSEARQFGGEKLGALAEDIEM FARHCVESQTSPDEYLPRVVALRPLFEQTLAALEREANPLVQRRPATFGRAVGY >Mature_134_residues MDEILVDWDEFRATRTQLGAAFVRILGYFREDGTKSVAAIEEAMRARDPRGLVMPAHTLKSEARQFGGEKLGALAEDIEM FARHCVESQTSPDEYLPRVVALRPLFEQTLAALEREANPLVQRRPATFGRAVGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15066; Mature: 15066
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEILVDWDEFRATRTQLGAAFVRILGYFREDGTKSVAAIEEAMRARDPRGLVMPAHTLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHH SEARQFGGEKLGALAEDIEMFARHCVESQTSPDEYLPRVVALRPLFEQTLAALEREANPL HHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH VQRRPATFGRAVGY HHHCCCHHHHHCCC >Mature Secondary Structure MDEILVDWDEFRATRTQLGAAFVRILGYFREDGTKSVAAIEEAMRARDPRGLVMPAHTLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHH SEARQFGGEKLGALAEDIEMFARHCVESQTSPDEYLPRVVALRPLFEQTLAALEREANPL HHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH VQRRPATFGRAVGY HHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA