Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487650

Identifier: 103487650

GI number: 103487650

Start: 2278882

End: 2279442

Strand: Reverse

Name: 103487650

Synonym: Sala_2169

Alternate gene names: NA

Gene position: 2279442-2278882 (Counterclockwise)

Preceding gene: 103487654

Following gene: 103487646

Centisome position: 68.14

GC content: 61.85

Gene sequence:

>561_bases
ATGCCAGACGATCCAAAGTCACCGACAGACGCGGGTTTTCCGCCCAACGCCGTGCATCTGGTGCGCACGACGCAGCAGAT
CACGATGCAATTGTCGCAGATGGCCGACCAGAAAGCGTCGATCCTGATGGGCGCGACCTTTGTGGTGTTTACGCTCGCGG
TGGGACAGGCGCGCACGGGCAGCGGTGCGCTCGCGATGCCGCTCACCATCCTCGCGACCTTTTCCTTCCTTTCGGCGCTG
CTCGCGGTGTCGGCGGTGCTGCCGCGCGTGGGACAGGCGCCGCCCGTCGTCTACAAGGACGGCAAGGATCACAGCAACAT
CCTCTTTTTCGGCCGTTTCTCGCAGATGGATGAAGATGACTATATCGCCGCGGTCAAGGCGCGCCTGCGCAGCGAAGAAG
ACATCTACGAAACGATGCTGCGCGACACCTATCAGAATGGCATGGTGCTGGCGCGGCGCAAATATCGCTATCTCGCCTAT
GCCTATCGCCTGTTCGTTGTCGGCCTGACGCTGACCTTTGGGGCGTTCGGGGTGGAGATGGCGCGGATGTGGACGGAGTG
A

Upstream 100 bases:

>100_bases
TGCGCGCTTGGCAAGCGATTGCGGCGGGAACAGGGCAGCATCTTGCCGACAAGGGCGCGCCGTGCCATCGCTGTTGCGGG
TCGAACATGAGGACAGGCCG

Downstream 100 bases:

>100_bases
GTCGCCAGGCTGTATCGACATTCGGACGAGGGTGAGCCGAAAATGGCGGTTTGCCGTGTCCCGGAGCCAGCCTGCTAGAG
CGCGATGACATGATATTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPDDPKSPTDAGFPPNAVHLVRTTQQITMQLSQMADQKASILMGATFVVFTLAVGQARTGSGALAMPLTILATFSFLSAL
LAVSAVLPRVGQAPPVVYKDGKDHSNILFFGRFSQMDEDDYIAAVKARLRSEEDIYETMLRDTYQNGMVLARRKYRYLAY
AYRLFVVGLTLTFGAFGVEMARMWTE

Sequences:

>Translated_186_residues
MPDDPKSPTDAGFPPNAVHLVRTTQQITMQLSQMADQKASILMGATFVVFTLAVGQARTGSGALAMPLTILATFSFLSAL
LAVSAVLPRVGQAPPVVYKDGKDHSNILFFGRFSQMDEDDYIAAVKARLRSEEDIYETMLRDTYQNGMVLARRKYRYLAY
AYRLFVVGLTLTFGAFGVEMARMWTE
>Mature_185_residues
PDDPKSPTDAGFPPNAVHLVRTTQQITMQLSQMADQKASILMGATFVVFTLAVGQARTGSGALAMPLTILATFSFLSALL
AVSAVLPRVGQAPPVVYKDGKDHSNILFFGRFSQMDEDDYIAAVKARLRSEEDIYETMLRDTYQNGMVLARRKYRYLAYA
YRLFVVGLTLTFGAFGVEMARMWTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20619; Mature: 20488

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDDPKSPTDAGFPPNAVHLVRTTQQITMQLSQMADQKASILMGATFVVFTLAVGQARTG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SGALAMPLTILATFSFLSALLAVSAVLPRVGQAPPVVYKDGKDHSNILFFGRFSQMDEDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCH
YIAAVKARLRSEEDIYETMLRDTYQNGMVLARRKYRYLAYAYRLFVVGLTLTFGAFGVEM
HHHHHHHHHCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARMWTE
HHHHCC
>Mature Secondary Structure 
PDDPKSPTDAGFPPNAVHLVRTTQQITMQLSQMADQKASILMGATFVVFTLAVGQARTG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SGALAMPLTILATFSFLSALLAVSAVLPRVGQAPPVVYKDGKDHSNILFFGRFSQMDEDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCH
YIAAVKARLRSEEDIYETMLRDTYQNGMVLARRKYRYLAYAYRLFVVGLTLTFGAFGVEM
HHHHHHHHHCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARMWTE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA