Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487576

Identifier: 103487576

GI number: 103487576

Start: 2201761

End: 2202498

Strand: Reverse

Name: 103487576

Synonym: Sala_2095

Alternate gene names: NA

Gene position: 2202498-2201761 (Counterclockwise)

Preceding gene: 103487579

Following gene: 103487575

Centisome position: 65.84

GC content: 52.98

Gene sequence:

>738_bases
ATGGCCGACGGCAGTGCAATTGAGTGGACCGACGCAACTTGGAATCCCGTTACGGGCTGCACCAAGATCACGACTGGCTG
CGATAACTGTTATGCTGAGCGCTTTGCAGAGCGTTGGCGCGGCATTCCTGGGCATCCCTTCGAAAATGGCTTCGACTTAG
TTCTTCGACCAGAGCGGCTTGACCAGCCGCTTCGCTGGAAACGAAGCCGGATGATCTTCGTCAATTCCATGAGTGACCTC
TTCCACAAAGGTGTGCCCAAGTCGTTCGTTGACGCCGTGTTCGAGACAATGGAAGCAGCTGATTGGCATATTTTTCAGGT
ACTTACAAAGAGAAGTTCGCGGATGCGCGATTACCTGAAAAGTCGTTACGAGCAACGCACGCCTCCGCAACATATCTGGC
TCGGCGTTTCTGTCGAGGACGCAAAAGGAGCAGCACGCATAGAGCATCTCCGTGCTGCGCCCGCCAGCGTGCGCTTTCTT
TCCGTTGAACCCCTTATCGGCCCTGTCGGAGAGGTCGATCTGTCAGATATCCATTGGGTGATTGCCGGAGGAGAGAGTGG
TCCCGGCGCTCGGATTCTTAATATAGAATGGGCGCGACAAATCAGAGACGAATGCGAAAGGCAAAATGTATCTTTCTTTT
TCAAGCAGTGGGGAGGTATAAGGCCAAAAAGTGGCGGTAGAGATCTTGATGGGCGCGAGTGGAATGACTTTCCTTCTATG
AAAGCAGCTTCCGGATAA

Upstream 100 bases:

>100_bases
CCTCAGATGGCTGGCTGTGATTCTCTAATGAAATTGGGAAAATCCGAGCGTAATGCTGGAATTATGCAGCACGCTAACGA
TAGAAATCTTAGGAAATGTT

Downstream 100 bases:

>100_bases
TGGCAATTGACTCCGCACATTATATTGGGCGTGAGCAAGCGCTCGTAAAGCACACATTTCTTGATCGATATCTTCCATCT
CTAATTGGAAAAGTGTGCTC

Product: phage Gp37Gp68

Products: NA

Alternate protein names: Phage /Gp; Bacteriophage Protein Gp; Gp37gp68 Family Protein; ABC Transporter Subunit; Phage ; ABC Transporter; Bacteriophage Protein; Phage Protein Gp; Phage Protein; Phage Gp

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERLDQPLRWKRSRMIFVNSMSDL
FHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLKSRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFL
SVEPLIGPVGEVDLSDIHWVIAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM
KAASG

Sequences:

>Translated_245_residues
MADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERLDQPLRWKRSRMIFVNSMSDL
FHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLKSRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFL
SVEPLIGPVGEVDLSDIHWVIAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM
KAASG
>Mature_244_residues
ADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERLDQPLRWKRSRMIFVNSMSDLF
HKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLKSRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFLS
VEPLIGPVGEVDLSDIHWVIAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSMK
AASG

Specific function: Unknown

COG id: COG4422

COG function: function code S; Bacteriophage protein gp37

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27866; Mature: 27735

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERL
CCCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHC
DQPLRWKRSRMIFVNSMSDLFHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLK
CCCHHHCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFLSVEPLIGPVGEVDLSDIHWV
HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEE
IAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM
EECCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KAASG
CCCCC
>Mature Secondary Structure 
ADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERL
CCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHC
DQPLRWKRSRMIFVNSMSDLFHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLK
CCCHHHCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFLSVEPLIGPVGEVDLSDIHWV
HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEE
IAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM
EECCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KAASG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA