| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487576
Identifier: 103487576
GI number: 103487576
Start: 2201761
End: 2202498
Strand: Reverse
Name: 103487576
Synonym: Sala_2095
Alternate gene names: NA
Gene position: 2202498-2201761 (Counterclockwise)
Preceding gene: 103487579
Following gene: 103487575
Centisome position: 65.84
GC content: 52.98
Gene sequence:
>738_bases ATGGCCGACGGCAGTGCAATTGAGTGGACCGACGCAACTTGGAATCCCGTTACGGGCTGCACCAAGATCACGACTGGCTG CGATAACTGTTATGCTGAGCGCTTTGCAGAGCGTTGGCGCGGCATTCCTGGGCATCCCTTCGAAAATGGCTTCGACTTAG TTCTTCGACCAGAGCGGCTTGACCAGCCGCTTCGCTGGAAACGAAGCCGGATGATCTTCGTCAATTCCATGAGTGACCTC TTCCACAAAGGTGTGCCCAAGTCGTTCGTTGACGCCGTGTTCGAGACAATGGAAGCAGCTGATTGGCATATTTTTCAGGT ACTTACAAAGAGAAGTTCGCGGATGCGCGATTACCTGAAAAGTCGTTACGAGCAACGCACGCCTCCGCAACATATCTGGC TCGGCGTTTCTGTCGAGGACGCAAAAGGAGCAGCACGCATAGAGCATCTCCGTGCTGCGCCCGCCAGCGTGCGCTTTCTT TCCGTTGAACCCCTTATCGGCCCTGTCGGAGAGGTCGATCTGTCAGATATCCATTGGGTGATTGCCGGAGGAGAGAGTGG TCCCGGCGCTCGGATTCTTAATATAGAATGGGCGCGACAAATCAGAGACGAATGCGAAAGGCAAAATGTATCTTTCTTTT TCAAGCAGTGGGGAGGTATAAGGCCAAAAAGTGGCGGTAGAGATCTTGATGGGCGCGAGTGGAATGACTTTCCTTCTATG AAAGCAGCTTCCGGATAA
Upstream 100 bases:
>100_bases CCTCAGATGGCTGGCTGTGATTCTCTAATGAAATTGGGAAAATCCGAGCGTAATGCTGGAATTATGCAGCACGCTAACGA TAGAAATCTTAGGAAATGTT
Downstream 100 bases:
>100_bases TGGCAATTGACTCCGCACATTATATTGGGCGTGAGCAAGCGCTCGTAAAGCACACATTTCTTGATCGATATCTTCCATCT CTAATTGGAAAAGTGTGCTC
Product: phage Gp37Gp68
Products: NA
Alternate protein names: Phage /Gp; Bacteriophage Protein Gp; Gp37gp68 Family Protein; ABC Transporter Subunit; Phage ; ABC Transporter; Bacteriophage Protein; Phage Protein Gp; Phage Protein; Phage Gp
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERLDQPLRWKRSRMIFVNSMSDL FHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLKSRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFL SVEPLIGPVGEVDLSDIHWVIAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM KAASG
Sequences:
>Translated_245_residues MADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERLDQPLRWKRSRMIFVNSMSDL FHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLKSRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFL SVEPLIGPVGEVDLSDIHWVIAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM KAASG >Mature_244_residues ADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERLDQPLRWKRSRMIFVNSMSDLF HKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLKSRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFLS VEPLIGPVGEVDLSDIHWVIAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSMK AASG
Specific function: Unknown
COG id: COG4422
COG function: function code S; Bacteriophage protein gp37
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27866; Mature: 27735
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERL CCCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHC DQPLRWKRSRMIFVNSMSDLFHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLK CCCHHHCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFLSVEPLIGPVGEVDLSDIHWV HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEE IAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM EECCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KAASG CCCCC >Mature Secondary Structure ADGSAIEWTDATWNPVTGCTKITTGCDNCYAERFAERWRGIPGHPFENGFDLVLRPERL CCCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHC DQPLRWKRSRMIFVNSMSDLFHKGVPKSFVDAVFETMEAADWHIFQVLTKRSSRMRDYLK CCCHHHCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SRYEQRTPPQHIWLGVSVEDAKGAARIEHLRAAPASVRFLSVEPLIGPVGEVDLSDIHWV HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEE IAGGESGPGARILNIEWARQIRDECERQNVSFFFKQWGGIRPKSGGRDLDGREWNDFPSM EECCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KAASG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA