Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487561

Identifier: 103487561

GI number: 103487561

Start: 2185256

End: 2185882

Strand: Reverse

Name: 103487561

Synonym: Sala_2080

Alternate gene names: NA

Gene position: 2185882-2185256 (Counterclockwise)

Preceding gene: 103487562

Following gene: 103487558

Centisome position: 65.34

GC content: 65.39

Gene sequence:

>627_bases
ATGGATCGTACCGCGCGCGCGCGCGATCCCGACGGCCTTGGGCCATTGCATCAGAGCCGCGCCGCTGACGGTGACCAATG
TTTGCCGGCGCCGAGCGCCGCGGTCGCGATGTCGTGGAACGCGGCGGTCGGCGCGCTGTCGACGATGACGTCCGACCGGG
CCACCAGTTCGCCGATGTCCACGATCGGCACCGGCTTTTGCAGCGCGGCCATGGCGGCTTGCGCGCGCGATTACCCCACC
TCGTCGTGCCGTTCGAGCCGCGGCACATCTTTGGTGCGGCGTCGAACTTCATCGAACATGCCGCGGAGATGCAGACCAGG
CTTGCCGCCAAGACGAAAAAGCGATCCCTATATCTTTCTCAAGACCGTCGAGAGCGTCGTCGGTCCCGGCGACACGGTCG
CGGTGCCGCCGCAGGTGGAACGCCCGGACTGGGAGGTCGAACTGGGCGTCGCGATCGGCAAGGCGGGAAAGAATGTCGCG
GTGGCCGACGCGCACGCACTGATCGCAGGCTATACGGTGGTCAATGACGTGTCGGCACGTGACCGCACGCGGCGGAGCGA
CTTTCCGTTATTTATGAACAGATTGCCTGTCTTTCGACGATCCTCGAACTCCGGGCAGGCGATCTGA

Upstream 100 bases:

>100_bases
GCGGTTCGGTGAGTTCGCCGAAGTCGATCCGGTTGCGCACGACATGATCGGCCTTGATCAGCGACATCACCGGCTTGCGC
GTAACAACCATCGTGACCGA

Downstream 100 bases:

>100_bases
TCGCCTCCGGCACCCCCGCGGGGGCCGGCATGGGGCGCGGTCTGTTCCTGAAGGATGGCGACGTCATGTCGGCGTGGGTC
GGGGGGGGGGATTTTGACGG

Product: fumarylacetoacetate (FAA) hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MDRTARARDPDGLGPLHQSRAADGDQCLPAPSAAVAMSWNAAVGALSTMTSDRATSSPMSTIGTGFCSAAMAACARDYPT
SSCRSSRGTSLVRRRTSSNMPRRCRPGLPPRRKSDPYIFLKTVESVVGPGDTVAVPPQVERPDWEVELGVAIGKAGKNVA
VADAHALIAGYTVVNDVSARDRTRRSDFPLFMNRLPVFRRSSNSGQAI

Sequences:

>Translated_208_residues
MDRTARARDPDGLGPLHQSRAADGDQCLPAPSAAVAMSWNAAVGALSTMTSDRATSSPMSTIGTGFCSAAMAACARDYPT
SSCRSSRGTSLVRRRTSSNMPRRCRPGLPPRRKSDPYIFLKTVESVVGPGDTVAVPPQVERPDWEVELGVAIGKAGKNVA
VADAHALIAGYTVVNDVSARDRTRRSDFPLFMNRLPVFRRSSNSGQAI
>Mature_208_residues
MDRTARARDPDGLGPLHQSRAADGDQCLPAPSAAVAMSWNAAVGALSTMTSDRATSSPMSTIGTGFCSAAMAACARDYPT
SSCRSSRGTSLVRRRTSSNMPRRCRPGLPPRRKSDPYIFLKTVESVVGPGDTVAVPPQVERPDWEVELGVAIGKAGKNVA
VADAHALIAGYTVVNDVSARDRTRRSDFPLFMNRLPVFRRSSNSGQAI

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI40786394, Length=74, Percent_Identity=55.4054054054054, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI156231349, Length=74, Percent_Identity=52.7027027027027, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 22149; Mature: 22149

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTARARDPDGLGPLHQSRAADGDQCLPAPSAAVAMSWNAAVGALSTMTSDRATSSPMS
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHH
TIGTGFCSAAMAACARDYPTSSCRSSRGTSLVRRRTSSNMPRRCRPGLPPRRKSDPYIFL
HHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEH
KTVESVVGPGDTVAVPPQVERPDWEVELGVAIGKAGKNVAVADAHALIAGYTVVNDVSAR
EEHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHH
DRTRRSDFPLFMNRLPVFRRSSNSGQAI
HHHCCCCCCHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MDRTARARDPDGLGPLHQSRAADGDQCLPAPSAAVAMSWNAAVGALSTMTSDRATSSPMS
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCHH
TIGTGFCSAAMAACARDYPTSSCRSSRGTSLVRRRTSSNMPRRCRPGLPPRRKSDPYIFL
HHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEH
KTVESVVGPGDTVAVPPQVERPDWEVELGVAIGKAGKNVAVADAHALIAGYTVVNDVSAR
EEHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHH
DRTRRSDFPLFMNRLPVFRRSSNSGQAI
HHHCCCCCCHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]