| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487558
Identifier: 103487558
GI number: 103487558
Start: 2182600
End: 2182836
Strand: Reverse
Name: 103487558
Synonym: Sala_2077
Alternate gene names: NA
Gene position: 2182836-2182600 (Counterclockwise)
Preceding gene: 103487561
Following gene: 103487557
Centisome position: 65.25
GC content: 71.73
Gene sequence:
>237_bases ATGTCGCAGCCATTTTCCCGTATTCTTCATCCCTTTGACGTTGACCGCCATCCGCGGCCCGAGCCGGAGGTCGCGCGCGC CCTGCTGGCGCGCTGGACATCGGACCGCGCGGCGCCTTGCAGCCGGTCCGTGCTGCGTCGGCCGCCTGGCGCCTATCGCG CCCGCACGACGCGCGACGTGCAGGCGGCGCTGCGGATGATCGATGGCAGGAGCGGGGGGCGACCGCGACCCCAATGA
Upstream 100 bases:
>100_bases CCTGCTCCCCTCTTGACGCGACTCATGTCCGGTCCGAAATTGTCCCGGCGGCGATACGCCGCGGCGACGAAAAGGAGCGA CGCAGGAAGGAGGCACGATC
Downstream 100 bases:
>100_bases GCGATTCCGCATTGGCCAGGCAACTGCGGGGCTATGGCCTGACCACGGCCGAAATTCACTATTACCGGCCCGATCATCCC TCGCTTCTGCAGCTTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSQPFSRILHPFDVDRHPRPEPEVARALLARWTSDRAAPCSRSVLRRPPGAYRARTTRDVQAALRMIDGRSGGRPRPQ
Sequences:
>Translated_78_residues MSQPFSRILHPFDVDRHPRPEPEVARALLARWTSDRAAPCSRSVLRRPPGAYRARTTRDVQAALRMIDGRSGGRPRPQ >Mature_77_residues SQPFSRILHPFDVDRHPRPEPEVARALLARWTSDRAAPCSRSVLRRPPGAYRARTTRDVQAALRMIDGRSGGRPRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8872; Mature: 8741
Theoretical pI: Translated: 12.28; Mature: 12.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPFSRILHPFDVDRHPRPEPEVARALLARWTSDRAAPCSRSVLRRPPGAYRARTTRDV CCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHH QAALRMIDGRSGGRPRPQ HHHHHHHHCCCCCCCCCC >Mature Secondary Structure SQPFSRILHPFDVDRHPRPEPEVARALLARWTSDRAAPCSRSVLRRPPGAYRARTTRDV CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHH QAALRMIDGRSGGRPRPQ HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA