Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487478

Identifier: 103487478

GI number: 103487478

Start: 2105225

End: 2105632

Strand: Reverse

Name: 103487478

Synonym: Sala_1995

Alternate gene names: NA

Gene position: 2105632-2105225 (Counterclockwise)

Preceding gene: 103487481

Following gene: 103487477

Centisome position: 62.95

GC content: 66.42

Gene sequence:

>408_bases
ATGGCCATCGAAAATGGGAGCGCTTTTCTGCTCAAGGTCGGCGACGGCGGCGCGCCGCCGACCTATCGGACCGTCGCTGG
GCTGCGCACGACGCAACTGTCGGTGAACGGCGAGGCGGTGAACGTCACCACCAAGGATTCGGGCGGATGGCGCGAGTTGC
TGTCGGGCGCGGGGGTACGGTCGGTGTCGGTGAGCGCCGCGGGCATCTTTACCGGGTCCGATGCCGAGCTGCGGCTGCGC
GGCCATGCGCTGTCGGGCGTGATCGACGATTATGAGCTGAGCTTCGAGAGCGGCGAGCGGCTGCGCGGGCGCTTTCTGGT
CACGCGGCTCGACTATGCCGGCGATTATAATGGCGAGCGCAATTACACGCTGAACCTCGAATCGAGCGGCGCGGTGGTGA
GCCTGTGA

Upstream 100 bases:

>100_bases
GTCGCGGCGGGCGACTGGACCATCGCAGCCAGAACCAGTGTCGTAATCAGCATCCTGCGACTCCCCATTCCGCATGATTA
TTTTTCAAGGAGATTAGACG

Downstream 100 bases:

>100_bases
GCGCGTCGGCGAAGATGGGGGCGAACGCGCTGCGCGGCGAGGCGGAACTATGCGTCGCGGGCGAACGGCTGGTGCTGCGC
CCGAGCTTTGCGGCGCTGGT

Product: Phage major tail protein, TP901-1

Products: NA

Alternate protein names: Phage Tail Protein -1 Family; Gene Transfer Agent Orf; Phage Protein; Tail Protein

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAIENGSAFLLKVGDGGAPPTYRTVAGLRTTQLSVNGEAVNVTTKDSGGWRELLSGAGVRSVSVSAAGIFTGSDAELRLR
GHALSGVIDDYELSFESGERLRGRFLVTRLDYAGDYNGERNYTLNLESSGAVVSL

Sequences:

>Translated_135_residues
MAIENGSAFLLKVGDGGAPPTYRTVAGLRTTQLSVNGEAVNVTTKDSGGWRELLSGAGVRSVSVSAAGIFTGSDAELRLR
GHALSGVIDDYELSFESGERLRGRFLVTRLDYAGDYNGERNYTLNLESSGAVVSL
>Mature_134_residues
AIENGSAFLLKVGDGGAPPTYRTVAGLRTTQLSVNGEAVNVTTKDSGGWRELLSGAGVRSVSVSAAGIFTGSDAELRLRG
HALSGVIDDYELSFESGERLRGRFLVTRLDYAGDYNGERNYTLNLESSGAVVSL

Specific function: Unknown

COG id: COG5437

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14232; Mature: 14101

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIENGSAFLLKVGDGGAPPTYRTVAGLRTTQLSVNGEAVNVTTKDSGGWRELLSGAGVR
CEECCCCEEEEEECCCCCCCCEEEECCEEEEEEEECCCEEEEEECCCCCHHHHHCCCCCE
SVSVSAAGIFTGSDAELRLRGHALSGVIDDYELSFESGERLRGRFLVTRLDYAGDYNGER
EEEEEEEEEEECCCCEEEEECEEECCEECCEEECCCCCCCCCEEEEEEEEECCCCCCCCC
NYTLNLESSGAVVSL
CEEEEECCCCCEEEC
>Mature Secondary Structure 
AIENGSAFLLKVGDGGAPPTYRTVAGLRTTQLSVNGEAVNVTTKDSGGWRELLSGAGVR
EECCCCEEEEEECCCCCCCCEEEECCEEEEEEEECCCEEEEEECCCCCHHHHHCCCCCE
SVSVSAAGIFTGSDAELRLRGHALSGVIDDYELSFESGERLRGRFLVTRLDYAGDYNGER
EEEEEEEEEEECCCCEEEEECEEECCEECCEEECCCCCCCCCEEEEEEEEECCCCCCCCC
NYTLNLESSGAVVSL
CEEEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA