| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is rhlE [H]
Identifier: 103487431
GI number: 103487431
Start: 2052468
End: 2053847
Strand: Reverse
Name: rhlE [H]
Synonym: Sala_1947
Alternate gene names: 103487431
Gene position: 2053847-2052468 (Counterclockwise)
Preceding gene: 103487433
Following gene: 103487430
Centisome position: 61.4
GC content: 66.23
Gene sequence:
>1380_bases ATGACAAGTTTTAACGACTTTGGCTTGCACGCCGACATCAATCGAGCGCTTGCCGCCAAGGATTATACCCAGCCGACCCC GATCCAGACACAGGCGATCCCGCCGCTGATGAAGGGCCGCGACCTGTGCGGCATCGCGCAGACCGGGACCGGCAAGACCG CCGGCTTCTCGCTCCCCTCGATCCATCACCTTTTGACCTATCCGCACCGCCCGACCCCGCGCGGCTGCCGGATGCTCGTC CTCGCGCCGACGCGCGAGCTTGCCGCGCAGATCGCGCAGAGCTGCCGCGATTACGGCCGCTTTACCAAGCTCAGCGTCTC GACCGTCTTCGGCGGCGTGCCGATCAACAAGCAGATCCGCGACCTTTCGCAGGGCGTCGATATCCTCGTCGCGACGCCGG GCCGCCTGCTCGACCTGATCGACCAGCGCGCGCTGCGTCTCGACGATGTTGAAATCTTCGTGCTCGACGAAGCCGATCAG ATGATGGACATGGGTTTCATCCATTCGCTGCGCCGCGTTGCAAAGCTGTTGCCCTCGCGGCGCCAGAACCTGTTCTTCTC GGCGACCATGCCGAAGGAGATTGCGGGCCTTGCCGACCAGTTCCTCAACGATCCGGTTACCGTGTCGGTCGCGCCGCAGG CGACGACCGCCGAAAAGGTCCGCCAGTTCGCCACTTTCGTCGAACAGAAGGAAAAGCAGGCGCTGCTCCATCACGTCATC AAGACGTCGGACATCGATCGCGCGCTGATCTTCACGCGCACCAAACATGGCGCCGACCGCGTCGTGCGTCACCTGAAGGG TGCGGGCATCGAGGCGTTCGCCATCCACGGCAACAAGAGCCAGGCGCAGCGCACCGCCGCGCTGCAGGCCTTTCGTTCGG GCCAGGTGCGCCTGCTTGTCGCAACCGACATCGCCGCGCGCGGCATCGACGTGTCGGGGGTCAGCCATGTCATCAATTTC GAGATCCCGAACGTCCCCGAACAATATGTTCACCGCATCGGTCGCACGGCGCGCGCCGGGGCAGAGGGCATCGCGATCAG CTTCATCGCCCCCGACGAGCGGCCGTACATACGCGACATCGAGCGCGTGACGCGGACCAGGGCCGAGCCGATGCCGCTTC CCGAAGGCTTCAACGAACTGGTGCGCAACCTTCCCAAGCCGGTGCAGCCGCCGCGCGATACCGGCAGCAGGGGCCGCGAT CCGAACCGCCAGCGTCAGGATGCGCGTCGCCAGCCGAGCGGCGGCCAACCTCGCGGTGATCGCGGTCCGCGCCGCGATGC TCCGGCCGGCGAAGGCGCCGAAGGCCAGCGCAAGCGCCGCTTCCGCCCGCGCAACAAAAGCGTCGGCGCGCACAAAGGCG CGGTGAAGCGCGTCGGTTGA
Upstream 100 bases:
>100_bases AGAGGCACCCTTTCACGCGGGTCGTTTCGAACCCGCGGCCGTGCGCCGTCCGTTCGCAAGCGAACGGATGCGCCTGCGCG TCGCCCATAGTGAGTATTTT
Downstream 100 bases:
>100_bases CGCACTGTTGACATGCGTTAGACCCTCTTGGCCCCTCTCCTTCAGGGGAGGGGCTTGGCAAGGGGCAGCGGATGATCGAC GCAGAGGCAGCGGCACCTAT
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MTSFNDFGLHADINRALAAKDYTQPTPIQTQAIPPLMKGRDLCGIAQTGTGKTAGFSLPSIHHLLTYPHRPTPRGCRMLV LAPTRELAAQIAQSCRDYGRFTKLSVSTVFGGVPINKQIRDLSQGVDILVATPGRLLDLIDQRALRLDDVEIFVLDEADQ MMDMGFIHSLRRVAKLLPSRRQNLFFSATMPKEIAGLADQFLNDPVTVSVAPQATTAEKVRQFATFVEQKEKQALLHHVI KTSDIDRALIFTRTKHGADRVVRHLKGAGIEAFAIHGNKSQAQRTAALQAFRSGQVRLLVATDIAARGIDVSGVSHVINF EIPNVPEQYVHRIGRTARAGAEGIAISFIAPDERPYIRDIERVTRTRAEPMPLPEGFNELVRNLPKPVQPPRDTGSRGRD PNRQRQDARRQPSGGQPRGDRGPRRDAPAGEGAEGQRKRRFRPRNKSVGAHKGAVKRVG
Sequences:
>Translated_459_residues MTSFNDFGLHADINRALAAKDYTQPTPIQTQAIPPLMKGRDLCGIAQTGTGKTAGFSLPSIHHLLTYPHRPTPRGCRMLV LAPTRELAAQIAQSCRDYGRFTKLSVSTVFGGVPINKQIRDLSQGVDILVATPGRLLDLIDQRALRLDDVEIFVLDEADQ MMDMGFIHSLRRVAKLLPSRRQNLFFSATMPKEIAGLADQFLNDPVTVSVAPQATTAEKVRQFATFVEQKEKQALLHHVI KTSDIDRALIFTRTKHGADRVVRHLKGAGIEAFAIHGNKSQAQRTAALQAFRSGQVRLLVATDIAARGIDVSGVSHVINF EIPNVPEQYVHRIGRTARAGAEGIAISFIAPDERPYIRDIERVTRTRAEPMPLPEGFNELVRNLPKPVQPPRDTGSRGRD PNRQRQDARRQPSGGQPRGDRGPRRDAPAGEGAEGQRKRRFRPRNKSVGAHKGAVKRVG >Mature_458_residues TSFNDFGLHADINRALAAKDYTQPTPIQTQAIPPLMKGRDLCGIAQTGTGKTAGFSLPSIHHLLTYPHRPTPRGCRMLVL APTRELAAQIAQSCRDYGRFTKLSVSTVFGGVPINKQIRDLSQGVDILVATPGRLLDLIDQRALRLDDVEIFVLDEADQM MDMGFIHSLRRVAKLLPSRRQNLFFSATMPKEIAGLADQFLNDPVTVSVAPQATTAEKVRQFATFVEQKEKQALLHHVIK TSDIDRALIFTRTKHGADRVVRHLKGAGIEAFAIHGNKSQAQRTAALQAFRSGQVRLLVATDIAARGIDVSGVSHVINFE IPNVPEQYVHRIGRTARAGAEGIAISFIAPDERPYIRDIERVTRTRAEPMPLPEGFNELVRNLPKPVQPPRDTGSRGRDP NRQRQDARRQPSGGQPRGDRGPRRDAPAGEGAEGQRKRRFRPRNKSVGAHKGAVKRVG
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=351, Percent_Identity=41.8803418803419, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI38201710, Length=351, Percent_Identity=41.8803418803419, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI4758138, Length=367, Percent_Identity=38.6920980926431, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI301171467, Length=367, Percent_Identity=41.1444141689373, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=41.1444141689373, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=41.1444141689373, Blast_Score=272, Evalue=4e-73, Organism=Homo sapiens, GI169881239, Length=378, Percent_Identity=39.9470899470899, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI13514809, Length=378, Percent_Identity=39.9470899470899, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI7661920, Length=372, Percent_Identity=37.6344086021505, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI224593278, Length=396, Percent_Identity=37.3737373737374, Blast_Score=265, Evalue=9e-71, Organism=Homo sapiens, GI21071032, Length=367, Percent_Identity=40.0544959128065, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=38.8268156424581, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=38.8268156424581, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=38.8268156424581, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI222352149, Length=409, Percent_Identity=35.9413202933985, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=38.8268156424581, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI41327773, Length=367, Percent_Identity=37.874659400545, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI45446747, Length=363, Percent_Identity=34.9862258953168, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI45446743, Length=363, Percent_Identity=34.9862258953168, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=37.6068376068376, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI164419743, Length=402, Percent_Identity=34.3283582089552, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI51094101, Length=402, Percent_Identity=34.3283582089552, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=35.3591160220994, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI41327771, Length=381, Percent_Identity=34.9081364829396, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=36.1930294906166, Blast_Score=231, Evalue=9e-61, Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=36.1930294906166, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI188035877, Length=382, Percent_Identity=34.5549738219895, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=31.6216216216216, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI31542656, Length=387, Percent_Identity=34.8837209302326, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=36.4116094986807, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=32.0441988950276, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI13514831, Length=366, Percent_Identity=32.7868852459016, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=33.1476323119777, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI50659095, Length=371, Percent_Identity=34.2318059299191, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=33.1476323119777, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=31.2849162011173, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=31.9209039548023, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=30.4469273743017, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=30.4469273743017, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI41327779, Length=366, Percent_Identity=33.3333333333333, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=31.8681318681319, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=28.6057692307692, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI256223453, Length=389, Percent_Identity=29.305912596401, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI9506931, Length=413, Percent_Identity=30.0242130750605, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI8922886, Length=361, Percent_Identity=31.3019390581717, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI6005743, Length=361, Percent_Identity=31.0249307479224, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI62241022, Length=342, Percent_Identity=31.5789473684211, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI256773275, Length=403, Percent_Identity=30.0248138957816, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI9966805, Length=338, Percent_Identity=31.9526627218935, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=31.9875776397516, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI154759257, Length=419, Percent_Identity=29.8329355608592, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI4826686, Length=341, Percent_Identity=29.6187683284457, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=33.9449541284404, Blast_Score=112, Evalue=6e-25, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=53.6193029490617, Blast_Score=406, Evalue=1e-114, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=40.6417112299465, Blast_Score=277, Evalue=1e-75, Organism=Escherichia coli, GI1790214, Length=400, Percent_Identity=37, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI1788930, Length=351, Percent_Identity=41.5954415954416, Blast_Score=251, Evalue=6e-68, Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=37.2881355932203, Blast_Score=222, Evalue=3e-59, Organism=Caenorhabditis elegans, GI115533224, Length=375, Percent_Identity=38.6666666666667, Blast_Score=268, Evalue=3e-72, Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=36.8279569892473, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=36.5591397849462, Blast_Score=262, Evalue=4e-70, Organism=Caenorhabditis elegans, GI71995718, Length=390, Percent_Identity=38.4615384615385, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI32565321, Length=394, Percent_Identity=36.0406091370558, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17510307, Length=386, Percent_Identity=38.3419689119171, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510309, Length=386, Percent_Identity=38.3419689119171, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995514, Length=386, Percent_Identity=38.3419689119171, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=36.096256684492, Blast_Score=248, Evalue=7e-66, Organism=Caenorhabditis elegans, GI17510559, Length=423, Percent_Identity=34.2789598108747, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=37.6044568245125, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=37.6044568245125, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=36.1344537815126, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=38.1868131868132, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=32.6145552560647, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17555296, Length=360, Percent_Identity=35.5555555555556, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=35.4330708661417, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17552642, Length=392, Percent_Identity=33.1632653061224, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=34.5844504021448, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=34.0540540540541, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=33.6021505376344, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI115532548, Length=370, Percent_Identity=33.2432432432432, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI115532546, Length=370, Percent_Identity=33.2432432432432, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI71982858, Length=358, Percent_Identity=32.4022346368715, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17509811, Length=369, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17505370, Length=366, Percent_Identity=31.1475409836066, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17508543, Length=395, Percent_Identity=30.6329113924051, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=32.7225130890052, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI193206561, Length=341, Percent_Identity=33.1378299120235, Blast_Score=174, Evalue=6e-44, Organism=Caenorhabditis elegans, GI71990816, Length=383, Percent_Identity=31.0704960835509, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=29.3956043956044, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17553716, Length=374, Percent_Identity=30.2139037433155, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17507641, Length=444, Percent_Identity=27.7027027027027, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI32564046, Length=429, Percent_Identity=28.2051282051282, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=28.0966767371601, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI25148203, Length=408, Percent_Identity=25.4901960784314, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=27.6315789473684, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=27.6315789473684, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17536103, Length=376, Percent_Identity=27.9255319148936, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71982862, Length=235, Percent_Identity=33.6170212765957, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI25148205, Length=331, Percent_Identity=25.6797583081571, Blast_Score=112, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71997889, Length=360, Percent_Identity=26.3888888888889, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=45.4545454545455, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=43.5028248587571, Blast_Score=300, Evalue=2e-82, Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=38.9041095890411, Blast_Score=270, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6325138, Length=365, Percent_Identity=39.4520547945205, Blast_Score=269, Evalue=6e-73, Organism=Saccharomyces cerevisiae, GI6321360, Length=380, Percent_Identity=38.9473684210526, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=364, Percent_Identity=37.6373626373626, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6320224, Length=383, Percent_Identity=32.8981723237598, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6320041, Length=370, Percent_Identity=32.972972972973, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=36.7123287671233, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6320173, Length=414, Percent_Identity=31.8840579710145, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=34.3243243243243, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=34.3243243243243, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=384, Percent_Identity=34.8958333333333, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=378, Percent_Identity=31.4814814814815, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=361, Percent_Identity=31.0249307479224, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6319714, Length=386, Percent_Identity=32.6424870466321, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=442, Percent_Identity=33.2579185520362, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=32.4022346368715, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=383, Percent_Identity=33.1592689295039, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6320400, Length=386, Percent_Identity=29.2746113989637, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=412, Percent_Identity=27.9126213592233, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=380, Percent_Identity=30.2631578947368, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=29.2682926829268, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=25.6658595641646, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322876, Length=415, Percent_Identity=26.9879518072289, Blast_Score=129, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=377, Percent_Identity=25.7294429708223, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=399, Percent_Identity=24.812030075188, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI17985987, Length=391, Percent_Identity=38.8746803069054, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI18857967, Length=374, Percent_Identity=39.3048128342246, Blast_Score=275, Evalue=7e-74, Organism=Drosophila melanogaster, GI21356161, Length=396, Percent_Identity=38.6363636363636, Blast_Score=270, Evalue=1e-72, Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=38.1720430107527, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI28574962, Length=366, Percent_Identity=39.344262295082, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=39.4444444444444, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24644487, Length=360, Percent_Identity=39.4444444444444, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI45551833, Length=360, Percent_Identity=39.4444444444444, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24644485, Length=360, Percent_Identity=39.4444444444444, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24644483, Length=360, Percent_Identity=39.4444444444444, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=39.4444444444444, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=39.4444444444444, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI21355075, Length=373, Percent_Identity=38.0697050938338, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24642151, Length=345, Percent_Identity=39.4202898550725, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=38.9972144846797, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=37.5706214689266, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=37.7358490566038, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=37.7358490566038, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=37.7358490566038, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=37.7358490566038, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24584994, Length=391, Percent_Identity=34.5268542199489, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=36.2397820163488, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24585582, Length=401, Percent_Identity=34.6633416458853, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24583279, Length=371, Percent_Identity=33.1536388140162, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI24583281, Length=371, Percent_Identity=33.1536388140162, Blast_Score=231, Evalue=7e-61, Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=39.3548387096774, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=34.3490304709141, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17136814, Length=384, Percent_Identity=34.6354166666667, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24666101, Length=376, Percent_Identity=35.6382978723404, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI20130173, Length=472, Percent_Identity=29.8728813559322, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI28571808, Length=367, Percent_Identity=31.3351498637602, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI28571809, Length=367, Percent_Identity=31.3351498637602, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=32.033426183844, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=32.033426183844, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=32.033426183844, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=30.4232804232804, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI21355559, Length=357, Percent_Identity=33.8935574229692, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI17647335, Length=395, Percent_Identity=28.3544303797468, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=29.1878172588832, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24668515, Length=341, Percent_Identity=29.0322580645161, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI19920478, Length=377, Percent_Identity=29.1777188328912, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=26.647564469914, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=26.9417475728155, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI28571338, Length=210, Percent_Identity=27.6190476190476, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI18859659, Length=210, Percent_Identity=27.6190476190476, Blast_Score=99, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50683; Mature: 50552
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFNDFGLHADINRALAAKDYTQPTPIQTQAIPPLMKGRDLCGIAQTGTGKTAGFSLPS CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCH IHHLLTYPHRPTPRGCRMLVLAPTRELAAQIAQSCRDYGRFTKLSVSTVFGGVPINKQIR HHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEHHHHHCCCCCCHHHH DLSQGVDILVATPGRLLDLIDQRALRLDDVEIFVLDEADQMMDMGFIHSLRRVAKLLPSR HHHCCCEEEEECCHHHHHHHHHHHCEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH RQNLFFSATMPKEIAGLADQFLNDPVTVSVAPQATTAEKVRQFATFVEQKEKQALLHHVI HHCEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KTSDIDRALIFTRTKHGADRVVRHLKGAGIEAFAIHGNKSQAQRTAALQAFRSGQVRLLV HHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEE ATDIAARGIDVSGVSHVINFEIPNVPEQYVHRIGRTARAGAEGIAISFIAPDERPYIRDI EECHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHCCCCCEEEEEECCCCCHHHHHH ERVTRTRAEPMPLPEGFNELVRNLPKPVQPPRDTGSRGRDPNRQRQDARRQPSGGQPRGD HHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC RGPRRDAPAGEGAEGQRKRRFRPRNKSVGAHKGAVKRVG CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSFNDFGLHADINRALAAKDYTQPTPIQTQAIPPLMKGRDLCGIAQTGTGKTAGFSLPS CCCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCH IHHLLTYPHRPTPRGCRMLVLAPTRELAAQIAQSCRDYGRFTKLSVSTVFGGVPINKQIR HHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEHHHHHCCCCCCHHHH DLSQGVDILVATPGRLLDLIDQRALRLDDVEIFVLDEADQMMDMGFIHSLRRVAKLLPSR HHHCCCEEEEECCHHHHHHHHHHHCEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH RQNLFFSATMPKEIAGLADQFLNDPVTVSVAPQATTAEKVRQFATFVEQKEKQALLHHVI HHCEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KTSDIDRALIFTRTKHGADRVVRHLKGAGIEAFAIHGNKSQAQRTAALQAFRSGQVRLLV HHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEE ATDIAARGIDVSGVSHVINFEIPNVPEQYVHRIGRTARAGAEGIAISFIAPDERPYIRDI EECHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHCCCCCEEEEEECCCCCHHHHHH ERVTRTRAEPMPLPEGFNELVRNLPKPVQPPRDTGSRGRDPNRQRQDARRQPSGGQPRGD HHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC RGPRRDAPAGEGAEGQRKRRFRPRNKSVGAHKGAVKRVG CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]