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The map label for this gene is glcB [H]

Identifier: 103487419

GI number: 103487419

Start: 2040111

End: 2042204

Strand: Reverse

Name: glcB [H]

Synonym: Sala_1935

Alternate gene names: 103487419

Gene position: 2042204-2040111 (Counterclockwise)

Preceding gene: 103487422

Following gene: 103487414

Centisome position: 61.05

GC content: 66.48

Gene sequence:

>2094_bases
ATGACCGAATTTCTCGACCGCTCGGGCCTGTCCGTCGATTCGCGGCTGGCCGATTTCATCGAGCAGCGCGCGCTGCCCGG
CACGGGGCTGGACGCCGCGCGCTTCTGGGCCGATTTCGCTGCTCTGCTGGGCCAGTTTGCGCCGGAAAATACGGAGCTGC
TGGCGAAGCGCGAGGCGTTGCAGTCGCAGATCGACGCCTGGCATCGGGCCCGCGAAGGCCAGCCGCACGATCCCGCCGCT
TATCAGCGCTTCCTGTCCGAGATCGGCTATCTCGTCCCCGAACCCGAGCCGTTTGCGATCGGCACGGCGAATGTCGATCC
GGAAATCGCAACAATGGCCGGGCCGCAGCTCGTCGTGCCCGCCCTCAACGCACGCTTTGCCCTGAACGCCGCCAACGCGC
GCTGGGGCAGCCTCTATGACGCGCTTTACGGTACCGACGCACTCGACGCGCCGCCTGCGAAGCCCGGCGGCTATGATGCG
GAACGCGGCGCGGCGGTGATCGCGCGCGCCAAGGCCTTTCTGGACGACGCGGTGCCGCTGGCGTCGGGTCGCTGGGCCGA
CTGGCAGGGCGGACAGCTTTTGCTTGCCGATCCGTCGCAATGGGTCGGCAGCAGAACCGGCGGTATTCTGCTCCGCCACA
ATGGCCTGCACATCGAGCTGGTGATCGACCCCGACGGCGCGATCGGCAAGACCGACCCGGCGGGGATTTCCGATGTCATC
CTCGAAGCCGCGCTGACCACCATCATCGACCTTGAGGACAGCGTCGCGGCGGTCGATGGCGAGGACAAGACGCTCGGCTA
TGCGAACTGGCTGGGGCTGATGCGCGGCGACCTCACCGAAAGTTTCGAAAAGGGCGGCAAGATCGTCACGCGCGCCATGG
CGACCGACCGCGAATGGACGTCGCCCGACGGCGAGCCGTTCACGCTCCACGGCCGCAGTGTGATGTTCGTGCGAAATGTC
GGCCATCTGATGACGACGCCGATGATCCGGCTGCCCGGTGGCGCCGAAGCGCCCGAAGGGCTGTGCGATGCGGTCATCAC
CAGCCTGTGCTCGCTCCACGATCTGAAGGGCCTCGGCGCCCTCAGGAACAGTCGCGCGGGCAGCATCTATATCGTCAAGC
CCAAGCAGCACGGGCCCGAGGAATGCGGCTTCACGAACCGGCTGTTCGACGCGGTCGAGGACATGCTGGGGCTGGCGCGC
CACACGATCAAGGTCGGGGTGATGGACGAGGAACGTCGCACCAGCGCGAACCTTGCCGCCTGCATCCGCGCGGTGAAGGA
CCGCATCGTCTTTATCAACACCGGCTTTCTCGACCGCACCGGCGACGAGATTCACACGTCGATGCGCGCGGGACCGATGA
TTCCGAAGGGCGAGATGAAGGCGTCGGACTGGATCGCCGCCTATGAGGATCGCAACGTCCGCATCGGGCTCGCCTGCGGC
CTGTCGGGCAAGGCGCAGATCGGCAAGGGCATGTGGGCGATGCCCGACATGATGCGGGCGATGCTCGAGGCGAAAATCGG
CCACCCCAGATCGGGCGCGAACACCGCCTGGGTTCCCTCGCCGACCGCGGCGACGCTGCATGCGCTGCATTATCATATGG
TCGATGTGTTTGCGCGGCAGAAGGAGATCGCGCGCGAGGCGGTGCCGTCGCTGGACCGCCTGCTCACCATTCCCGTCGCC
GTGGGGCGCAATTGGAGCGACGCCGAAATCGCGCGCGAACTCGACAATAATTGCCAGGGCATATTGGGCTATGTCGTACG
CTGGATCGACCAGGGCGTCGGCTGTTCCAAGGTGCCCGACATCGACGACGTCGGCCTGATGGAGGATCGCGCGACGCTGC
GGATCAGCAGCCAGGCGCTCGCCAACTGGCTCCTCCACGGCGTCTGCACGCCCGAACAGGTCGACGCCGCGCTGGCGCGG
ATGGCGGCGAAGGTCGATGCCCAGAATGCGGGCGACCCGCTGTACGAAAAGCTGACGCCCGATAGCGTCGCGTATCGGGC
AGCGCGCGCGCTGATCTTCGAAGGCGTGGCGCAGCCGTCGGGCTACACCGAACCGCTGCTGCACAAATATCGGCAGATGA
AGAAGGCGGGGTGA

Upstream 100 bases:

>100_bases
AAAAGCGCCCATTGCCAATCGAAACCAATCGCGGCATAGGGCTGCTGCCCTTTCCTCCCCGGGTCCACGGGCGCATCGGC
GCCGACCAGAGGGTGTTTGC

Downstream 100 bases:

>100_bases
ACGGCCGGAAGCGGTCATACGATCCTCCCCGGAACGGGGAGGGGGAGGATCGGCGGATCACAACCCCAAAACCGCCATCA
CGCGCAGGCGCGGCAACATC

Product: malate synthase G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 696

Protein sequence:

>697_residues
MTEFLDRSGLSVDSRLADFIEQRALPGTGLDAARFWADFAALLGQFAPENTELLAKREALQSQIDAWHRAREGQPHDPAA
YQRFLSEIGYLVPEPEPFAIGTANVDPEIATMAGPQLVVPALNARFALNAANARWGSLYDALYGTDALDAPPAKPGGYDA
ERGAAVIARAKAFLDDAVPLASGRWADWQGGQLLLADPSQWVGSRTGGILLRHNGLHIELVIDPDGAIGKTDPAGISDVI
LEAALTTIIDLEDSVAAVDGEDKTLGYANWLGLMRGDLTESFEKGGKIVTRAMATDREWTSPDGEPFTLHGRSVMFVRNV
GHLMTTPMIRLPGGAEAPEGLCDAVITSLCSLHDLKGLGALRNSRAGSIYIVKPKQHGPEECGFTNRLFDAVEDMLGLAR
HTIKVGVMDEERRTSANLAACIRAVKDRIVFINTGFLDRTGDEIHTSMRAGPMIPKGEMKASDWIAAYEDRNVRIGLACG
LSGKAQIGKGMWAMPDMMRAMLEAKIGHPRSGANTAWVPSPTAATLHALHYHMVDVFARQKEIAREAVPSLDRLLTIPVA
VGRNWSDAEIARELDNNCQGILGYVVRWIDQGVGCSKVPDIDDVGLMEDRATLRISSQALANWLLHGVCTPEQVDAALAR
MAAKVDAQNAGDPLYEKLTPDSVAYRAARALIFEGVAQPSGYTEPLLHKYRQMKKAG

Sequences:

>Translated_697_residues
MTEFLDRSGLSVDSRLADFIEQRALPGTGLDAARFWADFAALLGQFAPENTELLAKREALQSQIDAWHRAREGQPHDPAA
YQRFLSEIGYLVPEPEPFAIGTANVDPEIATMAGPQLVVPALNARFALNAANARWGSLYDALYGTDALDAPPAKPGGYDA
ERGAAVIARAKAFLDDAVPLASGRWADWQGGQLLLADPSQWVGSRTGGILLRHNGLHIELVIDPDGAIGKTDPAGISDVI
LEAALTTIIDLEDSVAAVDGEDKTLGYANWLGLMRGDLTESFEKGGKIVTRAMATDREWTSPDGEPFTLHGRSVMFVRNV
GHLMTTPMIRLPGGAEAPEGLCDAVITSLCSLHDLKGLGALRNSRAGSIYIVKPKQHGPEECGFTNRLFDAVEDMLGLAR
HTIKVGVMDEERRTSANLAACIRAVKDRIVFINTGFLDRTGDEIHTSMRAGPMIPKGEMKASDWIAAYEDRNVRIGLACG
LSGKAQIGKGMWAMPDMMRAMLEAKIGHPRSGANTAWVPSPTAATLHALHYHMVDVFARQKEIAREAVPSLDRLLTIPVA
VGRNWSDAEIARELDNNCQGILGYVVRWIDQGVGCSKVPDIDDVGLMEDRATLRISSQALANWLLHGVCTPEQVDAALAR
MAAKVDAQNAGDPLYEKLTPDSVAYRAARALIFEGVAQPSGYTEPLLHKYRQMKKAG
>Mature_696_residues
TEFLDRSGLSVDSRLADFIEQRALPGTGLDAARFWADFAALLGQFAPENTELLAKREALQSQIDAWHRAREGQPHDPAAY
QRFLSEIGYLVPEPEPFAIGTANVDPEIATMAGPQLVVPALNARFALNAANARWGSLYDALYGTDALDAPPAKPGGYDAE
RGAAVIARAKAFLDDAVPLASGRWADWQGGQLLLADPSQWVGSRTGGILLRHNGLHIELVIDPDGAIGKTDPAGISDVIL
EAALTTIIDLEDSVAAVDGEDKTLGYANWLGLMRGDLTESFEKGGKIVTRAMATDREWTSPDGEPFTLHGRSVMFVRNVG
HLMTTPMIRLPGGAEAPEGLCDAVITSLCSLHDLKGLGALRNSRAGSIYIVKPKQHGPEECGFTNRLFDAVEDMLGLARH
TIKVGVMDEERRTSANLAACIRAVKDRIVFINTGFLDRTGDEIHTSMRAGPMIPKGEMKASDWIAAYEDRNVRIGLACGL
SGKAQIGKGMWAMPDMMRAMLEAKIGHPRSGANTAWVPSPTAATLHALHYHMVDVFARQKEIAREAVPSLDRLLTIPVAV
GRNWSDAEIARELDNNCQGILGYVVRWIDQGVGCSKVPDIDDVGLMEDRATLRISSQALANWLLHGVCTPEQVDAALARM
AAKVDAQNAGDPLYEKLTPDSVAYRAARALIFEGVAQPSGYTEPLLHKYRQMKKAG

Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]

COG id: COG2225

COG function: function code C; Malate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malate synthase family. GlcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789348, Length=723, Percent_Identity=56.1549100968188, Blast_Score=814, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011076
- InterPro:   IPR001465
- InterPro:   IPR006253 [H]

Pfam domain/function: PF01274 Malate_synthase [H]

EC number: =2.3.3.9 [H]

Molecular weight: Translated: 75406; Mature: 75274

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFLDRSGLSVDSRLADFIEQRALPGTGLDAARFWADFAALLGQFAPENTELLAKREAL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QSQIDAWHRAREGQPHDPAAYQRFLSEIGYLVPEPEPFAIGTANVDPEIATMAGPQLVVP
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHCCCEEEEE
ALNARFALNAANARWGSLYDALYGTDALDAPPAKPGGYDAERGAAVIARAKAFLDDAVPL
CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
ASGRWADWQGGQLLLADPSQWVGSRTGGILLRHNGLHIELVIDPDGAIGKTDPAGISDVI
CCCCCCCCCCCEEEEECCHHHHCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCHHHHH
LEAALTTIIDLEDSVAAVDGEDKTLGYANWLGLMRGDLTESFEKGGKIVTRAMATDREWT
HHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCC
SPDGEPFTLHGRSVMFVRNVGHLMTTPMIRLPGGAEAPEGLCDAVITSLCSLHDLKGLGA
CCCCCEEEECCCEEEEEHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRNSRAGSIYIVKPKQHGPEECGFTNRLFDAVEDMLGLARHTIKVGVMDEERRTSANLAA
HHCCCCCEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
CIRAVKDRIVFINTGFLDRTGDEIHTSMRAGPMIPKGEMKASDWIAAYEDRNVRIGLACG
HHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCEEEECCCCEEEEEEEC
LSGKAQIGKGMWAMPDMMRAMLEAKIGHPRSGANTAWVPSPTAATLHALHYHMVDVFARQ
CCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KEIAREAVPSLDRLLTIPVAVGRNWSDAEIARELDNNCQGILGYVVRWIDQGVGCSKVPD
HHHHHHHHHHHHHHEEEHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
IDDVGLMEDRATLRISSQALANWLLHGVCTPEQVDAALARMAAKVDAQNAGDPLYEKLTP
CCCCCCCCCCHHEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
DSVAYRAARALIFEGVAQPSGYTEPLLHKYRQMKKAG
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TEFLDRSGLSVDSRLADFIEQRALPGTGLDAARFWADFAALLGQFAPENTELLAKREAL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QSQIDAWHRAREGQPHDPAAYQRFLSEIGYLVPEPEPFAIGTANVDPEIATMAGPQLVVP
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHCCCEEEEE
ALNARFALNAANARWGSLYDALYGTDALDAPPAKPGGYDAERGAAVIARAKAFLDDAVPL
CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
ASGRWADWQGGQLLLADPSQWVGSRTGGILLRHNGLHIELVIDPDGAIGKTDPAGISDVI
CCCCCCCCCCCEEEEECCHHHHCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCHHHHH
LEAALTTIIDLEDSVAAVDGEDKTLGYANWLGLMRGDLTESFEKGGKIVTRAMATDREWT
HHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCC
SPDGEPFTLHGRSVMFVRNVGHLMTTPMIRLPGGAEAPEGLCDAVITSLCSLHDLKGLGA
CCCCCEEEECCCEEEEEHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRNSRAGSIYIVKPKQHGPEECGFTNRLFDAVEDMLGLARHTIKVGVMDEERRTSANLAA
HHCCCCCEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
CIRAVKDRIVFINTGFLDRTGDEIHTSMRAGPMIPKGEMKASDWIAAYEDRNVRIGLACG
HHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCEEEECCCCEEEEEEEC
LSGKAQIGKGMWAMPDMMRAMLEAKIGHPRSGANTAWVPSPTAATLHALHYHMVDVFARQ
CCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KEIAREAVPSLDRLLTIPVAVGRNWSDAEIARELDNNCQGILGYVVRWIDQGVGCSKVPD
HHHHHHHHHHHHHHEEEHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
IDDVGLMEDRATLRISSQALANWLLHGVCTPEQVDAALARMAAKVDAQNAGDPLYEKLTP
CCCCCCCCCCHHEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
DSVAYRAARALIFEGVAQPSGYTEPLLHKYRQMKKAG
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA