Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487376

Identifier: 103487376

GI number: 103487376

Start: 1991681

End: 1992082

Strand: Reverse

Name: 103487376

Synonym: Sala_1892

Alternate gene names: NA

Gene position: 1992082-1991681 (Counterclockwise)

Preceding gene: 103487377

Following gene: 103487375

Centisome position: 59.55

GC content: 68.41

Gene sequence:

>402_bases
ATGAACATGCGTATCGATAGCGGTTCGCCCCCGCCGCCGGGGCAACAACCCGCGCCGCCGTCGCCACCGCCGGTACACGA
CACGATGCGCCGTCTGCAGATCGGCATCGCCGGGGTGCTGACGGTATTGCTGCTTGTCGGCATGGCCGGGCTGATCGGCG
ATCGCGCGCGCGAGCAGGTGACGGCCGAAGAGGCGTCGAGCCCCGACGTCAAGATGCCGGGCGACAACAAGACGGGCGGC
GCGCCGCTCGAAGAATTGGGCGTTCAGCCCGTGTCGCCGTCGTCGAAGGACGAAAATGCCGATCCGTCGATAAAGGTGCC
GCAGGCCATGGCGCCGACGGCGACCGTTCCCGATCTCGAACCCGATCCCGAACTTCAGCGCGCGCGCCAGTCGGCGCCGT
GA

Upstream 100 bases:

>100_bases
AGCGCATCGCAACCATTTTGTGCGACAGCGGGTTTCGCTATCTCTCGACGCTTTACAACCCCGAGTGGCTGGCCGCCAGG
GGACTGGGTGAGGCAAAGGG

Downstream 100 bases:

>100_bases
CGGCAGGGTTGCGCGGGCCTTTTCTGCGCGCTTGCTCGATTGCGATCCTGACCATCGCGCTCGCCTGGTTGGCGGGCGGG
CAGGCGCTGCTCGGCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNMRIDSGSPPPPGQQPAPPSPPPVHDTMRRLQIGIAGVLTVLLLVGMAGLIGDRAREQVTAEEASSPDVKMPGDNKTGG
APLEELGVQPVSPSSKDENADPSIKVPQAMAPTATVPDLEPDPELQRARQSAP

Sequences:

>Translated_133_residues
MNMRIDSGSPPPPGQQPAPPSPPPVHDTMRRLQIGIAGVLTVLLLVGMAGLIGDRAREQVTAEEASSPDVKMPGDNKTGG
APLEELGVQPVSPSSKDENADPSIKVPQAMAPTATVPDLEPDPELQRARQSAP
>Mature_133_residues
MNMRIDSGSPPPPGQQPAPPSPPPVHDTMRRLQIGIAGVLTVLLLVGMAGLIGDRAREQVTAEEASSPDVKMPGDNKTGG
APLEELGVQPVSPSSKDENADPSIKVPQAMAPTATVPDLEPDPELQRARQSAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13839; Mature: 13839

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMRIDSGSPPPPGQQPAPPSPPPVHDTMRRLQIGIAGVLTVLLLVGMAGLIGDRAREQV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEEASSPDVKMPGDNKTGGAPLEELGVQPVSPSSKDENADPSIKVPQAMAPTATVPDLE
HHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDPELQRARQSAP
CCHHHHHHHHCCC
>Mature Secondary Structure
MNMRIDSGSPPPPGQQPAPPSPPPVHDTMRRLQIGIAGVLTVLLLVGMAGLIGDRAREQV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEEASSPDVKMPGDNKTGGAPLEELGVQPVSPSSKDENADPSIKVPQAMAPTATVPDLE
HHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDPELQRARQSAP
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA