| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mraZ [C]
Identifier: 103487374
GI number: 103487374
Start: 1989745
End: 1990245
Strand: Reverse
Name: mraZ [C]
Synonym: Sala_1890
Alternate gene names: 103487374
Gene position: 1990245-1989745 (Counterclockwise)
Preceding gene: 103487375
Following gene: 103487373
Centisome position: 59.5
GC content: 64.87
Gene sequence:
>501_bases ATGGCGATTGTGACGCCCGGCCAATATGCGGGCACCAATTTCGCCGCGATCGATGGCAAGGGGCGCATCGCCGTCCCCTC GCAGTTCCGCAACAATGTGCCCCTCAATGCGGACGGTCAGCGCGTGCTCTGGGTCGGGTTTCACGAGAAGCTGCCGTGCC TCGTCGCCTATGGGCAGGATCAGTATGACCGGCTGAACGGCGAGATCGAGCGCGACCGCGAAACCGCGCGGCTGCGCAAC CTCGACTTCGACGAGGACAGCGAGTTCAAGAAACGCTTCAGCTATACCGAGCCTTATACGCTCGACGACAGTGGTCGATT CCTGCCCAGCTTCATCCACCGCGACCGCGTCGGCGATGTCGGCGCGACGGCCTTTGTGGGGTCGGGCCGCCGTCTCGAAA TCTGGTGGCTGCCGACGCTCGCCGAATGCGCCGAGGCCGACCCGGTGCTCCAGCGGCTTGCCGCCTCATGGGATGCCGCG AAAGGGAAGGGGCGAAAGTGA
Upstream 100 bases:
>100_bases TCGGAGAGGGGCATTCTCCACCCGTGACGAACCAGCCGGAATCCTGCGATTCCGGAAGCGGGAAAGTTATGCCCGGTGAC GCGAGGCAGGGGGCAGAGCG
Downstream 100 bases:
>100_bases CCGACCTTCCCCGCGATCCCCGTCACGATCCGGTCCTGCTTGATGAGGTCATCGCCGCGCTCGCCATTGCCCCGGGCGAG CGTCATGTCGATGCGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MAIVTPGQYAGTNFAAIDGKGRIAVPSQFRNNVPLNADGQRVLWVGFHEKLPCLVAYGQDQYDRLNGEIERDRETARLRN LDFDEDSEFKKRFSYTEPYTLDDSGRFLPSFIHRDRVGDVGATAFVGSGRRLEIWWLPTLAECAEADPVLQRLAASWDAA KGKGRK
Sequences:
>Translated_166_residues MAIVTPGQYAGTNFAAIDGKGRIAVPSQFRNNVPLNADGQRVLWVGFHEKLPCLVAYGQDQYDRLNGEIERDRETARLRN LDFDEDSEFKKRFSYTEPYTLDDSGRFLPSFIHRDRVGDVGATAFVGSGRRLEIWWLPTLAECAEADPVLQRLAASWDAA KGKGRK >Mature_165_residues AIVTPGQYAGTNFAAIDGKGRIAVPSQFRNNVPLNADGQRVLWVGFHEKLPCLVAYGQDQYDRLNGEIERDRETARLRNL DFDEDSEFKKRFSYTEPYTLDDSGRFLPSFIHRDRVGDVGATAFVGSGRRLEIWWLPTLAECAEADPVLQRLAASWDAAK GKGRK
Specific function: Unknown
COG id: COG2001
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18680; Mature: 18549
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVTPGQYAGTNFAAIDGKGRIAVPSQFRNNVPLNADGQRVLWVGFHEKLPCLVAYGQD CEEECCCCCCCCEEEEECCCCCEEECHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCC QYDRLNGEIERDRETARLRNLDFDEDSEFKKRFSYTEPYTLDDSGRFLPSFIHRDRVGDV HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCCC GATAFVGSGRRLEIWWLPTLAECAEADPVLQRLAASWDAAKGKGRK CCEEEECCCCEEEEEECCCHHHHCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AIVTPGQYAGTNFAAIDGKGRIAVPSQFRNNVPLNADGQRVLWVGFHEKLPCLVAYGQD EEECCCCCCCCEEEEECCCCCEEECHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCC QYDRLNGEIERDRETARLRNLDFDEDSEFKKRFSYTEPYTLDDSGRFLPSFIHRDRVGDV HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCCC GATAFVGSGRRLEIWWLPTLAECAEADPVLQRLAASWDAAKGKGRK CCEEEECCCCEEEEEECCCHHHHCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA