Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487344

Identifier: 103487344

GI number: 103487344

Start: 1954632

End: 1955975

Strand: Reverse

Name: 103487344

Synonym: Sala_1860

Alternate gene names: NA

Gene position: 1955975-1954632 (Counterclockwise)

Preceding gene: 103487345

Following gene: 103487343

Centisome position: 58.47

GC content: 69.87

Gene sequence:

>1344_bases
ATGAATGATTTGGCGGAACGGCTGGCGACCGCGATGCGGCGATTCGCCGGGGAGGGTGAACTTTCCGCACTTTCGCGGCT
GTCGGGCGGCGCGAATATGGAAAGCTGGGCGTTCGAGTGGAGCAGCGGGGGACGCGCTGCACCCTATGTCCTGCGGCGCG
CGCCGTCGGCGGCCTATATGGCCGATCGCCCCTTCGGCCACGCCGACGAGGCGGCGCTGGTGATCGCGGCGCGGGCGGGC
GGGGTGAAGGCGCCTGAAGTGGTGGGTGTGCTGGGCGATGCCGATGGCCTCGGCACGGGCTATGTCATGCGCCGCGTGAT
GGCGGAGGTGGCGCCGACGAAGATTCTTGGCGATCCGCCGCCGTCGCTGCTCGCCGATCTGGGGCGCGAACTGGCCCGCA
TCCACGCCATTCCGCTCGCCACGATCCCTCCGGCGATTCCGCACATGGACACGCGCGAGGCGCTCGCGGCGCTCAAGGCG
CGCTTCTTCGACTATGGCGGCGACCGGCCGGTCATCGCGCTCGCGATCCGATGGTGCGAGGATCATCTGCCCGCGCCCGC
CGATCCGGTGCTCGTCCATGGCGACTATCGCATGGGCAATGTCATGGTCGATGCGAACGGGCTTGCCGCGGTGCTCGACT
GGGAATTGGCGCATTTGGGCGACGCGCATGAAGATCTCGCCTTTGGCTGCATGACGGTGTGGCGCTTCGGGCGGCTCGAC
AGGCCGGCCCTTGGGTTGGGCAGTCTGGACGATTATTTTGCGGCCTATGAGGCGGGGGGCGGCGGTCCCGTCGATCGCGA
CCGCTTCCGCTTCTGGCTGATCTATCGCACGCTCTGGTGGGCGCTCGGCTGCCTCCAGATGGGCGAGGCGTGGCGGAGCG
GCGCGGACAGGACCGTCGAGCGCGTCGTCGTCGGGCGGCGCACCGCCGAACAGGAACTGGATTTGGTGCGGCTGCTGGAG
ACCGAGGCACCCGAATCCGAGCGCGCCCGCCCGCTGCCCCCTTCGCAGCCCGCCGCGCCCGCGCCGACCGGCGAGCCGAC
GAACCGCGAGATGGTGCAGGCGGTGCGCGACTGGATCGAAGGCGCGATCAAGCCGCACGCCGAGGGCCATGCGAAGTTCG
AAACGGTGGTCGCGATGAACGCGCTCGGGATCGTGCTGCGCGACCTCGATGCCGGAACGCGCGCCGAGGACAGGGCGCTG
ACGGACGAACTGCTGTCGGGCACGGCGACGCTCGCGCGGCCGGGCCTCCTCGCAAAGCTGCGCCGCGCGGTGCTCGACAA
ATGCGCGGTCGATAGTCCGAAATATGCCGCGCTCGCGGCGGCGCGCGCCGAATGGCGCCAATAA

Upstream 100 bases:

>100_bases
ATAGCATCCGCCGGTCGAAAGCGACAGGTTCGGTTCGTTGGGGATTGCAAATGTGGGGATTTTCCCATTGGTTCGACCGC
ATGGGCTGCGGGGTGTGGGG

Downstream 100 bases:

>100_bases
GCGACTAGGGAGAGAGACATGGATTTTGCGGTTCCGGCCGATTTGCAGGCCTATCTGGACGAACTCGACGCCTTCATCGA
AGCGGAGATCAAGCCGCTCG

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Tyrosine Protein KinaseAminoglycoside Phosphotransferase; FadE36 Aminoglycoside Phosphotransferase

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYMADRPFGHADEAALVIAARAG
GVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPPPSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKA
RFFDYGGDRPVIALAIRWCEDHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD
RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVERVVVGRRTAEQELDLVRLLE
TEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIEGAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRAL
TDELLSGTATLARPGLLAKLRRAVLDKCAVDSPKYAALAAARAEWRQ

Sequences:

>Translated_447_residues
MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYMADRPFGHADEAALVIAARAG
GVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPPPSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKA
RFFDYGGDRPVIALAIRWCEDHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD
RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVERVVVGRRTAEQELDLVRLLE
TEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIEGAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRAL
TDELLSGTATLARPGLLAKLRRAVLDKCAVDSPKYAALAAARAEWRQ
>Mature_447_residues
MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYMADRPFGHADEAALVIAARAG
GVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPPPSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKA
RFFDYGGDRPVIALAIRWCEDHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD
RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVERVVVGRRTAEQELDLVRLLE
TEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIEGAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRAL
TDELLSGTATLARPGLLAKLRRAVLDKCAVDSPKYAALAAARAEWRQ

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48330; Mature: 48330

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYM
CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHHHCCCCHHHH
ADRPFGHADEAALVIAARAGGVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPP
CCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCC
PSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKARFFDYGGDRPVIALAIRWCE
HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD
HCCCCCCCCEEEECCEEECCEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVE
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RVVVGRRTAEQELDLVRLLETEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIE
HHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRALTDELLSGTATLARPGLLAKL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHH
RRAVLDKCAVDSPKYAALAAARAEWRQ
HHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYM
CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHHHCCCCHHHH
ADRPFGHADEAALVIAARAGGVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPP
CCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCC
PSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKARFFDYGGDRPVIALAIRWCE
HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD
HCCCCCCCCEEEECCEEECCEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVE
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RVVVGRRTAEQELDLVRLLETEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIE
HHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRALTDELLSGTATLARPGLLAKL
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHH
RRAVLDKCAVDSPKYAALAAARAEWRQ
HHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA