Click here to switch to the map view.

The map label for this gene is 103487245

Identifier: 103487245

GI number: 103487245

Start: 1854793

End: 1855242

Strand: Reverse

Name: 103487245

Synonym: Sala_1760

Alternate gene names: NA

Gene position: 1855242-1854793 (Counterclockwise)

Preceding gene: 103487246

Following gene: 103487244

Centisome position: 55.46

GC content: 68.89

Gene sequence:

>450_bases
ATGCCCCGCGTCGACTTCTACCGCCTGACCCGCGATCCCGTCGAACGGGTGCTCCCCGCGCTTGCGGCGCGCGTCCTGGG
CAATGGCGACCGCCTGCTGGTGGTCGCCGCCGCGGCGATGCAGCGGCAGGACATCGACGCGGCGCTGTGGACCGCAAACC
CCGCGAGCTTTCTGCCGCACGGTCATGCGGGCACTCCCGACGAAGCGATCGAGCCGATCCTGCTGTCGGGCACGCTGGAC
ACTTCGCCGCCCAATGGTGCCAGCCGCCTTGCGCTCGCCGACGGCGAATGGCGCGAAGACGCCTTGGCGTTCGATCGCAC
CTTCTTCCTCTTCGACAACAGCCGCATCGACGATGCGCGCGCCACCTGGCGGGCGCTGGCGGCGCGCGACGATGTCGACA
ACCGCTTCTGGAAACAGGATGAAAACGGTCGCTGGTCCGAAGGGCCATAG

Upstream 100 bases:

>100_bases
ACGCAGCAATCTCCAGCCATCGGCCTTGTGCAAGGTTGCGGGCTGAAGATTGCTTCCCCCGGATCAAGTCCGGGGTCGCA
ATGACGATGGTGGGATAATG

Downstream 100 bases:

>100_bases
GCCGTCCACGCTCTTTCCTTGCGGTCCCGTAAAAGCGCGGCTAGAGGCGCGCGCATCGCAAACCATAACATCGCAGGAGC
TTTCCCATGGCGGTCACCCG

Product: DNA polymerase III chi subunit, HolC

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC; DNA Polymerase III Chi Subunit; DNA Polymerase III Subunit Chi HolC; DNA Polymerase III Chi Subunit Holc; DNA Polymerase III; DNA Polymerase III Chi Subunit Superfamily

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MPRVDFYRLTRDPVERVLPALAARVLGNGDRLLVVAAAAMQRQDIDAALWTANPASFLPHGHAGTPDEAIEPILLSGTLD
TSPPNGASRLALADGEWREDALAFDRTFFLFDNSRIDDARATWRALAARDDVDNRFWKQDENGRWSEGP

Sequences:

>Translated_149_residues
MPRVDFYRLTRDPVERVLPALAARVLGNGDRLLVVAAAAMQRQDIDAALWTANPASFLPHGHAGTPDEAIEPILLSGTLD
TSPPNGASRLALADGEWREDALAFDRTFFLFDNSRIDDARATWRALAARDDVDNRFWKQDENGRWSEGP
>Mature_148_residues
PRVDFYRLTRDPVERVLPALAARVLGNGDRLLVVAAAAMQRQDIDAALWTANPASFLPHGHAGTPDEAIEPILLSGTLDT
SPPNGASRLALADGEWREDALAFDRTFFLFDNSRIDDARATWRALAARDDVDNRFWKQDENGRWSEGP

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 16543; Mature: 16411

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVDFYRLTRDPVERVLPALAARVLGNGDRLLVVAAAAMQRQDIDAALWTANPASFLPH
CCCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEEECCCHHHCCC
GHAGTPDEAIEPILLSGTLDTSPPNGASRLALADGEWREDALAFDRTFFLFDNSRIDDAR
CCCCCCHHHCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHCEEEEEEECCCCCHHH
ATWRALAARDDVDNRFWKQDENGRWSEGP
HHHHHHHHCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PRVDFYRLTRDPVERVLPALAARVLGNGDRLLVVAAAAMQRQDIDAALWTANPASFLPH
CCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEEECCCHHHCCC
GHAGTPDEAIEPILLSGTLDTSPPNGASRLALADGEWREDALAFDRTFFLFDNSRIDDAR
CCCCCCHHHCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHCEEEEEEECCCCCHHH
ATWRALAARDDVDNRFWKQDENGRWSEGP
HHHHHHHHCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA