Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487206

Identifier: 103487206

GI number: 103487206

Start: 1811903

End: 1812478

Strand: Reverse

Name: 103487206

Synonym: Sala_1721

Alternate gene names: NA

Gene position: 1812478-1811903 (Counterclockwise)

Preceding gene: 103487207

Following gene: 103487205

Centisome position: 54.18

GC content: 70.49

Gene sequence:

>576_bases
ATGGCTATTGACCGACGCGGCTGGCTGCCGCTCGTCGCGCTGACCCTGTGGCCGGGCGTGGCAGCGGCGCAGTTGCCGGC
GCTCGGCCCGGCGGTCGAGCGGGTCGCGTCGAAGGCGACGGGCGTCGCGGCCGCCGACGAACGCGCGGCGATGGCGCGCT
TCGCCGCCTATGTGATGGCGCTGGCGAAGCGCGATTATGCAAGCGCCTATGCGATGCTGCGCCTGTCGTTCCAGGCGGCA
AACCCGCGGCTCGAATGGGAGATGAACCTGCGCAAGCGGCCCGTGCTGTGGGCCGACGGGACGCTGCGCGTGCTGCGGCT
GAGCTGGTATTCGGACCCGGCAGGCCAACCACCGGGCCTGTATGCCGCCTTCGATTTTCGCGGCGACCGCGCCGACGGGA
CGATGGATTGCGGTTATGTCGTCGTCCACCGCGCCGTGCCCGACGCGGCTTGGACCGTGGTGCGCACCGACACGTCCGAG
GTGCCGCCGGAGCTGATCGAGGAGGGCGTGCCCAAGGCCGACGTGCTGCGCCAGCTTCCCTGTTATCTGGGCAAGGGGAT
TGCGACGGCGTTCTGA

Upstream 100 bases:

>100_bases
CAGGGCATGGCGCCGCGCTATCCGAAACTCGCCGCCTTCGTGAACGCCTGCCATGCGCGCCCCGCGTGGCAGCGCGCGCG
CGCGAAAGGCGGCGCCTATT

Downstream 100 bases:

>100_bases
GCGGTGTGGGCGATCGCCTCCATCGCGACGAAGCGGCTTGTCGCACCGCCGCAAAATGCCTAATTCGCGCGCATGACATC
GACCAACGACATTCGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMALAKRDYASAYAMLRLSFQAA
NPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGLYAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSE
VPPELIEEGVPKADVLRQLPCYLGKGIATAF

Sequences:

>Translated_191_residues
MAIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMALAKRDYASAYAMLRLSFQAA
NPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGLYAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSE
VPPELIEEGVPKADVLRQLPCYLGKGIATAF
>Mature_190_residues
AIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMALAKRDYASAYAMLRLSFQAAN
PRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGLYAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSEV
PPELIEEGVPKADVLRQLPCYLGKGIATAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20803; Mature: 20672

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMA
CCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LAKRDYASAYAMLRLSFQAANPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGL
HHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCE
YAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSEVPPELIEEGVPKADVLRQLP
EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHH
CYLGKGIATAF
HHHCCCHHHCC
>Mature Secondary Structure 
AIDRRGWLPLVALTLWPGVAAAQLPALGPAVERVASKATGVAAADERAAMARFAAYVMA
CCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LAKRDYASAYAMLRLSFQAANPRLEWEMNLRKRPVLWADGTLRVLRLSWYSDPAGQPPGL
HHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCE
YAAFDFRGDRADGTMDCGYVVVHRAVPDAAWTVVRTDTSEVPPELIEEGVPKADVLRQLP
EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHHH
CYLGKGIATAF
HHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA