| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487074
Identifier: 103487074
GI number: 103487074
Start: 1664934
End: 1665701
Strand: Reverse
Name: 103487074
Synonym: Sala_1589
Alternate gene names: NA
Gene position: 1665701-1664934 (Counterclockwise)
Preceding gene: 103487087
Following gene: 103487073
Centisome position: 49.79
GC content: 59.38
Gene sequence:
>768_bases ATGACTTTCTTTTCCAGGTTCAAGCGGGGGAGACTGGCGCCCGCCGCCGACACACGTTCGATGGCTGATGGCATATTGCT GTATGCGATCGGCGATATTCATGGTCGCGACGATCTCTTTTCCGATCTGCTCGACAAGATCGCGGCCGACCGGCGGGGCC GCCCGCATGAGCTTTGTGTGCTGGTCCTGCTTGGCGACCTCGTGGATCGCGGCCCCGATTCCGATCGAGTCATTGAACGG GCGCTTTCGCTGCCCGCCCATTTCGATCGGGTCCATCATCTGATCGGTAACCACGAGGAATCGATGCTGGCGGCGCTCGC CAAGGACGTCCGCGCACTTCGCTTTTTCGTGCGCATCGGTGGTGAAGCTACGATCAGGAGCTATTTGCGCGACGACAAGC TCTATGATCGATTGACGTTCGAGGAACTCGCGGACGTTTTCAGCGACGCGGTTCCAAGGTCGCACATGGATTTCCTTCGC CGGGGTGAGGACATGGTGCGTTACGGAGACTATGTTTTTGTCCATGCCGGGGTGCGGGATTCGGTGCCACTTGATCGGCA GAAGCTGACCGATCTCCGATGGATTCGGGATGAGTTTCTGAGCAGCAAGCGGGACCACGGCGCGTTGATCGTCCACGGAC ACACGATTGCCGCGGAGGTGGAGGAACGCCCAAATCGCATCGGAATTGATACGGGCGCTTATCGAACCGGCCGCCTGACC GCCATCGGTCTTTATGGCACCGATCGGTGGTATCTGCAGACCCCGTAG
Upstream 100 bases:
>100_bases GACGCGCGGCGCCTTTGGCTGGTCAACTATCAGCGACTTCGCTAAGGGCGGCCTTTCCCGATATTCGCTGTTCGTTTGTG GCAAGGTTTTTTGCGGGCTG
Downstream 100 bases:
>100_bases ACGGCAAATGGCGCCGCCCGACACCGGCGCACGGCATGGCGAACGCTTCGGCGCATTCATCGGGAAGCAACTTGTGCTTG AATCCGAATGTGACTAATCA
Product: metallophosphoesterase
Products: NA
Alternate protein names: Serine/Threonine Protein Phosphatase; Bis(5Nucleosyl)-Tetraphosphatase ApaH; Serine/Threonine Protein Phosphatase Family Protein; Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Specific Protein Phosphatase Protein; Serine/Threonine Protein Phosphatase I; Diadenosine Tetraphosphatase; Diadenosine Tetraphosphatase-Like Protein; Phosphatase; Serinethreonine Protein Phosphatase; Calcineurin-Like Phosphoesterase; Bis(5-Nucleosyl)-Tetraphosphatase; Serine/Threonine Protein Phosphatase Protein; Serine/Threonine Phosphatase; Protein Phosphatase; Serine/Threonine-Protein Phosphatase
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTFFSRFKRGRLAPAADTRSMADGILLYAIGDIHGRDDLFSDLLDKIAADRRGRPHELCVLVLLGDLVDRGPDSDRVIER ALSLPAHFDRVHHLIGNHEESMLAALAKDVRALRFFVRIGGEATIRSYLRDDKLYDRLTFEELADVFSDAVPRSHMDFLR RGEDMVRYGDYVFVHAGVRDSVPLDRQKLTDLRWIRDEFLSSKRDHGALIVHGHTIAAEVEERPNRIGIDTGAYRTGRLT AIGLYGTDRWYLQTP
Sequences:
>Translated_255_residues MTFFSRFKRGRLAPAADTRSMADGILLYAIGDIHGRDDLFSDLLDKIAADRRGRPHELCVLVLLGDLVDRGPDSDRVIER ALSLPAHFDRVHHLIGNHEESMLAALAKDVRALRFFVRIGGEATIRSYLRDDKLYDRLTFEELADVFSDAVPRSHMDFLR RGEDMVRYGDYVFVHAGVRDSVPLDRQKLTDLRWIRDEFLSSKRDHGALIVHGHTIAAEVEERPNRIGIDTGAYRTGRLT AIGLYGTDRWYLQTP >Mature_254_residues TFFSRFKRGRLAPAADTRSMADGILLYAIGDIHGRDDLFSDLLDKIAADRRGRPHELCVLVLLGDLVDRGPDSDRVIERA LSLPAHFDRVHHLIGNHEESMLAALAKDVRALRFFVRIGGEATIRSYLRDDKLYDRLTFEELADVFSDAVPRSHMDFLRR GEDMVRYGDYVFVHAGVRDSVPLDRQKLTDLRWIRDEFLSSKRDHGALIVHGHTIAAEVEERPNRIGIDTGAYRTGRLTA IGLYGTDRWYLQTP
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29072; Mature: 28941
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFSRFKRGRLAPAADTRSMADGILLYAIGDIHGRDDLFSDLLDKIAADRRGRPHELCV CCHHHHHHCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LVLLGDLVDRGPDSDRVIERALSLPAHFDRVHHLIGNHEESMLAALAKDVRALRFFVRIG HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GEATIRSYLRDDKLYDRLTFEELADVFSDAVPRSHMDFLRRGEDMVRYGDYVFVHAGVRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCEEEEECCCCC SVPLDRQKLTDLRWIRDEFLSSKRDHGALIVHGHTIAAEVEERPNRIGIDTGAYRTGRLT CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEHHHHCCCEECCCCCCCCCCCEE AIGLYGTDRWYLQTP EEEEECCCEEEEECC >Mature Secondary Structure TFFSRFKRGRLAPAADTRSMADGILLYAIGDIHGRDDLFSDLLDKIAADRRGRPHELCV CHHHHHHCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LVLLGDLVDRGPDSDRVIERALSLPAHFDRVHHLIGNHEESMLAALAKDVRALRFFVRIG HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GEATIRSYLRDDKLYDRLTFEELADVFSDAVPRSHMDFLRRGEDMVRYGDYVFVHAGVRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCEEEEECCCCC SVPLDRQKLTDLRWIRDEFLSSKRDHGALIVHGHTIAAEVEERPNRIGIDTGAYRTGRLT CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEHHHHCCCEECCCCCCCCCCCEE AIGLYGTDRWYLQTP EEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA