| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486909
Identifier: 103486909
GI number: 103486909
Start: 1475304
End: 1475609
Strand: Direct
Name: 103486909
Synonym: Sala_1423
Alternate gene names: NA
Gene position: 1475304-1475609 (Clockwise)
Preceding gene: 103486907
Following gene: 103486913
Centisome position: 44.1
GC content: 65.03
Gene sequence:
>306_bases ATGACCGAGGCTTTTCTTCACGGCACGGTGCATGTCGCGCGCGACGATATGCAGGCCGCACTGACCGCCGATCCCGCCGC GCTGGCGCTGTGGCAGGCGCTGACTCCGCTGGGGCGCAACGAGTTCATCTGTTGGGTCGAAGACGCCAGGCAAGACAAGA CGCGCGCGCGCCGAATCGTGCGAACCCTGGAGGAATTGCACGAGGGCAAGAAGCGCCCTTGCTGCTGGGCGGGGTGCATC CATCGCACCGACAAGGCGCCAAGCCGCTGGCAGCAGGCGGTGCTGATCGACAAGAAGGCAAAATAG
Upstream 100 bases:
>100_bases GCGGTGATGTGGGGAAAAGCGGCGCAAATGGCAAGCCGCCCCCCTACCCCCCGGCGCGCCCGTTTGACCTGGCAACGGGG CGCACTTATGACCTCACGCC
Downstream 100 bases:
>100_bases GGAGCCAGCGCCTCAGCGCAGCGTCATCGTATCGCCTTCGACATTCACCGCATCGAGTTTCGACAGGAAACTTTGCCCAA GCAGCGACACACCCATGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTEAFLHGTVHVARDDMQAALTADPAALALWQALTPLGRNEFICWVEDARQDKTRARRIVRTLEELHEGKKRPCCWAGCI HRTDKAPSRWQQAVLIDKKAK
Sequences:
>Translated_101_residues MTEAFLHGTVHVARDDMQAALTADPAALALWQALTPLGRNEFICWVEDARQDKTRARRIVRTLEELHEGKKRPCCWAGCI HRTDKAPSRWQQAVLIDKKAK >Mature_100_residues TEAFLHGTVHVARDDMQAALTADPAALALWQALTPLGRNEFICWVEDARQDKTRARRIVRTLEELHEGKKRPCCWAGCIH RTDKAPSRWQQAVLIDKKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11519; Mature: 11388
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAFLHGTVHVARDDMQAALTADPAALALWQALTPLGRNEFICWVEDARQDKTRARRIV CCCCHHHCHHEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH RTLEELHEGKKRPCCWAGCIHRTDKAPSRWQQAVLIDKKAK HHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure TEAFLHGTVHVARDDMQAALTADPAALALWQALTPLGRNEFICWVEDARQDKTRARRIV CCCHHHCHHEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH RTLEELHEGKKRPCCWAGCIHRTDKAPSRWQQAVLIDKKAK HHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA